RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 URB1O60287 2271 aaKnown RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 TRGV5A0A0B4J1U4 118 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 TRAV3A0A0B4J244 114 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 KBTBD11-OT1A0A1B0GTJ5 212 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 PINLYPA6NC86 204 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 SRRM4A7MD48 611 aaKnown RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 ATP5LO75964 103 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 MOSP00540 346 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 IGHV3-7P01780 117 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 TCRAP04437 139 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 MYCNOSP40205 109 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 SMAGPQ0VAQ4 97 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 KLRB1Q12918 225 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 ORMDL3Q8N138 153 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 LYPD1Q8N2G4 141 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 ZCCHC24Q8N2G6 241 aaKnown RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 CIARTQ8N365 385 aaPredicted RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 C8orf46Q8TAG6 207 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 IFI27L1Q96BM0 104 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 HARBI1Q96MB7 349 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 TRGV9Q99603 122 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 MRPL16Q9NX20 251 aaKnown RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 TMEM14CQ9P0S9 112 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 CYSLTR1Q9Y271 337 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 TIMM8BQ9Y5J9 83 aaPredicted RBP5.21□□□□□ -1.58
USP28-202ENST00000535607 HCFC1P51610 2035 aa5.21□□□□□ -1.58
USP28-202ENST00000535607 CACNA1GO43497 2377 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 ESPL1Q14674 2120 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 hADV38S2A0JD32 116 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 WNT9BO14905 357 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 CSN3P07498 182 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 SAA2P0DJI9 122 aaPredicted RBP5.2□□□□□ -1.58
USP28-202ENST00000535607 PYYP10082 97 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 FGF6P10767 208 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 SRD5A1P18405 259 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 NMUP48645 174 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 RAB9AP51151 201 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 ZNF137PP52743 207 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 TWIST1Q15672 202 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 VMA21Q3ZAQ7 101 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 ADAMTSL5Q6ZMM2 481 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 ZNF493Q6ZR52 646 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 LINC00173Q6ZV60 143 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 Q86TA4 180 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 C11orf53Q8IXP5 236 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 TTC9CQ8N5M4 171 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 NRACQ8N912 160 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 TMEM75Q8N9X5 138 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 ATP6V0E2Q8NHE4 81 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 LINC00479Q96M42 142 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 PRELID3AQ96N28 172 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 SLC25A39Q9BZJ4 359 aaPredicted RBP5.2□□□□□ -1.58
USP28-202ENST00000535607 GTSF1LQ9H1H1 148 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 Q9H3A6 140 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 NDUFA4L2Q9NRX3 87 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 PKD1L2Q7Z442 2459 aa5.2□□□□□ -1.58
USP28-202ENST00000535607 TRAV5A0A0B4J249 113 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 A0A1W2PRD5 423 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 A0A1W2PRF3 423 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 A0A1W2PRM7 423 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 SRRM5B3KS81 715 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 MC5RP33032 325 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 CACNG7P62955 275 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 ZNF826PQ6ZT77 177 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 ZNF575Q86XF7 245 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 CD177Q8N6Q3 437 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 OR4C13Q8NGP0 309 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 TMEM167AQ8TBQ9 72 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 GTSF1Q8WW33 167 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 IGFBPL1Q8WX77 278 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 SRSF12Q8WXF0 261 aaKnown RBP5.19□□□□□ -1.58
USP28-202ENST00000535607 ARPC1AQ92747 370 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 FLYWCH2Q96CP2 140 aaKnown RBP5.19□□□□□ -1.58
USP28-202ENST00000535607 MAP1LC3AQ9H492 121 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 NXT2Q9NPJ8 142 aaKnown RBP5.19□□□□□ -1.58
USP28-202ENST00000535607 HIGD1AQ9Y241 93 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 HILPDAQ9Y5L2 63 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 TSSC4Q9Y5U2 329 aaPredicted RBP5.19□□□□□ -1.58
USP28-202ENST00000535607 U3KQK5 164 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 ACACBO00763 2458 aa5.19□□□□□ -1.58
USP28-202ENST00000535607 PPIAL4EA0A075B759 164 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 IGKV1OR2-108A0A075B7D4 117 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 TEX48A0A1B0GUV7 120 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 NCBP2LA6PVI3 153 aaKnown RBP5.18□□□□□ -1.58
USP28-202ENST00000535607 OR11H12B2RN74 326 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 TMEM262E9PQX1 116 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 LINC01619G3V211 115 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 SCGB2A1O75556 95 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 PPIAL4FP0DN26 164 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 ORM2P19652 201 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 EDN2P20800 178 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 GNG5P63218 68 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 C16orf54Q6UWD8 224 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 Q6ZR03 302 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 Q6ZT83 130 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 PRNTQ86SH4 94 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 CEND1Q8N111 149 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 TMEM116Q8NCL8 245 aa5.18□□□□□ -1.58
USP28-202ENST00000535607 OR11H1Q8NG94 326 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms