RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 LINC01556Q5JQF7 62 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 EIF4E3Q8N5X7 224 aaKnown RBP3.77□□□□□ -1.81
CTSB-216ENST00000530290 C11orf72Q8NBR9 251 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 NRG4Q8WWG1 115 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 MRPL53Q96EL3 112 aaKnown RBP3.77□□□□□ -1.81
CTSB-216ENST00000530290 TM2D2Q9BX73 214 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 SH3BGRL3Q9H299 93 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 RBKSQ9H477 322 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 ZNF331Q9NQX6 463 aaPredicted RBP3.77□□□□□ -1.81
CTSB-216ENST00000530290 COMMD3Q9UBI1 195 aa3.77□□□□□ -1.81
CTSB-216ENST00000530290 IGHV3-38A0A0C4DH36 116 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 C7orf71A4D174 169 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 ZNF253O75346 499 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 IL5P05113 134 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 NMBP08949 121 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 LINC00869P0C866 280 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 HAMPP81172 84 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 GUK1Q16774 197 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 CYP2G1PQ6ZSU1 146 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 BPIFA4PQ86YQ2 179 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 IQCF2Q8IXL9 164 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 OR52I2Q8NH67 350 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 TMEM37Q8WXS4 190 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 ARPC5LQ9BPX5 153 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 RTBDNQ9BSG5 229 aaPredicted RBP3.76□□□□□ -1.81
CTSB-216ENST00000530290 MRPL32Q9BYC8 188 aaKnown RBP3.76□□□□□ -1.81
CTSB-216ENST00000530290 SCP2D1Q9UJQ7 156 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 GPR132Q9UNW8 380 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 HHLA3Q9XRX5 114 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 RCL1Q9Y2P8 373 aaKnown RBP3.76□□□□□ -1.81
CTSB-216ENST00000530290 COX11Q9Y6N1 276 aa3.76□□□□□ -1.81
CTSB-216ENST00000530290 IBA57-AS1B1ANH7 110 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 KLLNB2CW77 178 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 FAM25AB3EWG3 89 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 FAM25CB3EWG5 89 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 FAM25GB3EWG6 89 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 PRSS46E5RG02 174 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 K7EQD1 137 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 MRPS12O15235 138 aaKnown RBP3.75□□□□□ -1.81
CTSB-216ENST00000530290 PITX3O75364 302 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 IGLV2-8P01709 118 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 OR5G3P0C626 314 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 AKAIN1P0CW23 69 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 ANXA7P20073 488 aaKnown RBP3.75□□□□□ -1.81
CTSB-216ENST00000530290 NEDD8Q15843 81 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 TOR2AQ5JU69 321 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 IGFL4Q6B9Z1 124 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 ZNF431Q8TF32 576 aaPredicted RBP3.75□□□□□ -1.81
CTSB-216ENST00000530290 ARV1Q9H2C2 271 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 GSN-AS1Q9NRJ2 163 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 PAIP2BQ9ULR5 123 aaKnown RBP3.75□□□□□ -1.81
CTSB-216ENST00000530290 PRELID1Q9Y255 219 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 STRAPQ9Y3F4 350 aaKnown RBP3.75□□□□□ -1.81
CTSB-216ENST00000530290 TNFRSF18Q9Y5U5 241 aa3.75□□□□□ -1.81
CTSB-216ENST00000530290 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TRAV12-3A0A0B4J271 114 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TRGV4A0A0C4DH28 118 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 FABP12A6NFH5 140 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 PMS2P5A8MQ11 134 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 WRBO00258 174 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 SYNGR2O43760 224 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 HPGDSO60760 199 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 MPDU1O75352 247 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 SEC11BP0C7V7 166 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 CRISP2P16562 243 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TNFSF8P32971 234 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 PDE6HQ13956 83 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TEPPQ6URK8 271 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 SCXQ7RTU7 201 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 LYZL2Q7Z4W2 148 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 OR4D10Q8NGI6 311 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 OR10G4Q8NGN3 311 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 SMIM4Q8WVI0 70 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 CHAC1Q9BUX1 264 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 FAM30AQ9NZY2 134 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 EXTL2Q9UBQ6 330 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 KLF12Q9Y4X4 402 aa3.74□□□□□ -1.81
CTSB-216ENST00000530290 TRAV8-3A0A0A6YYJ7 113 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 SMCO3A2RU48 225 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 RGS13O14921 159 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 CTDSPLO15194 276 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 CIDEAO60543 219 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 PRAF2O60831 178 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 IGLV2-11P01706 119 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 OR4E1P0C645 316 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 CT45A10P0DMU9 189 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 IAPPP10997 89 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 GYPEP15421 78 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 GATA2P23769 480 aaPredicted RBP3.73□□□□□ -1.81
CTSB-216ENST00000530290 FAUP35544 74 aaKnown RBP3.73□□□□□ -1.81
CTSB-216ENST00000530290 PPT1P50897 306 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 FHL2Q14192 279 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 ZNF846Q147U1 533 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 KIR3DS1Q14943 382 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 SPANXN5Q5MJ07 72 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 LINC00305Q7Z4B0 112 aa3.73□□□□□ -1.81
CTSB-216ENST00000530290 RMI2Q96E14 147 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms