RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ZNF253O75346 499 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 IGLV2-8P01709 118 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 MGST1P10620 155 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
CTNNA1-236ENST00000522792 ZNF705FA8MVS1 300 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 MT-ND4LP03901 98 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 CSN1S1P47710 185 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 KLF5Q13887 457 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 LINC00518Q8N0U6 118 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 FMC1Q96HJ9 113 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 ASCL2Q99929 193 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
CTNNA1-236ENST00000522792 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 A8MWP6 167 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 LGALS9O00182 355 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 SETXQ7Z333 2677 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 PROK1P58294 105 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 PRNTQ86SH4 94 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
CTNNA1-236ENST00000522792 IGLV2-11P01706 119 aa11.71□□□□□ -0.53
CTNNA1-236ENST00000522792 TCF24Q7RTU0 167 aa11.71□□□□□ -0.53
CTNNA1-236ENST00000522792 Q86TA4 180 aa11.71□□□□□ -0.53
CTNNA1-236ENST00000522792 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.53
CTNNA1-236ENST00000522792 C2orf70A6NJV1 201 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 H7BYZ3 331 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 K7EQM0 130 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 MEOX2P50222 304 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 FAM24BQ8N5W8 94 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 PRAC2D3DTV9 90 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 S100A9P06702 114 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 CBLN1P23435 193 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 FLI1Q01543 452 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 GBGT1Q8N5D6 347 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 TMEM75Q8N9X5 138 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 DLX4Q92988 240 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 RNASE7Q9H1E1 156 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 TUBA4BQ9H853 241 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 NRN1Q9NPD7 142 aa11.7□□□□□ -0.54
CTNNA1-236ENST00000522792 GCGP01275 180 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 LTAP01374 205 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 ERVFC1-1P60608 527 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 PSG3Q16557 428 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 OR10G8Q8NGN5 311 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 ANAPC16Q96DE5 110 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 PSG8Q9UQ74 426 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 F8P00451 2351 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 COLCA2A8K830 154 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 FOLR2P14207 255 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 BMI1P35226 326 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 C20orf173Q96LM9 149 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
CTNNA1-236ENST00000522792 SOCS3O14543 225 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 WFDC3Q8IUB2 231 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 C15orf54Q8N8G6 183 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 VGLL1Q99990 258 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 MLXQ9UH92 298 aa11.68□□□□□ -0.54
CTNNA1-236ENST00000522792 CCL24O00175 119 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 TFPI2P48307 235 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 ERCC8Q13216 396 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 OR9G4Q8NGQ1 327 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 MLST8Q9BVC4 326 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 SERTM2A0A1B0GWG4 89 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 CXorf65A6NEN9 183 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 PPP1R2P9O14990 202 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 ELOBQ15370 118 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 NSUN5P1Q3KNT7 163 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 Q8TAT8 98 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
CTNNA1-236ENST00000522792 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 TRBV6-1A0A0K0K1D8 114 aa11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 M0QZ24 198 aa11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 IBA57Q5T440 356 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
CTNNA1-236ENST00000522792 CXCL1P09341 107 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 FHL3Q13643 280 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 SMIM12Q96EX1 92 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 DEFB1P60022 68 aa11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 LINC00322Q6ZN03 302 aaPredicted RBP11.65□□□□□ -0.54
CTNNA1-236ENST00000522792 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms