RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 GNPDA2Q8TDQ7 276 aa-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 PARD6GQ9BYG4 376 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 CACYBPQ9HB71 228 aaKnown RBP-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 NAT8BQ9UHF3 227 aa-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 KMT2AQ03164 3969 aa-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 ESPL1Q14674 2120 aa-0.74□□□□□ -2.53
SNORA40.9-201ENST00000515895 PTPRQQ9UMZ3 2332 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 ZNF292O60281 2723 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 DUXBA0A1W2PPF3 345 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 FXYD1O00168 92 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 PIAS1O75925 651 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 IFNA7P01567 189 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 IMPG1Q17R60 797 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 TRAPPC5Q8IUR0 188 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 CST11Q9H112 138 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 APC2O95996 2303 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 CEP164Q9UPV0 1460 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 MUC12Q9UKN1 5478 aa-0.75□□□□□ -2.53
SNORA40.9-201ENST00000515895 A0A1W2PRS3 328 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 LYRM1O43325 122 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 TCRBP04435 133 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 CRHP06850 196 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 TMEM97Q5BJF2 176 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 ZCCHC23Q6ZST2 131 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 PIEZO2Q9H5I5 2752 aa-0.76□□□□□ -2.53
SNORA40.9-201ENST00000515895 DOPEY2Q9Y3R5 2298 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 SMIM23A6NLE4 172 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 RER1O15258 196 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 IFNA4P05014 189 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 IDO1P14902 403 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 NFYBP25208 207 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 ETV6P41212 452 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 COX6A2Q02221 97 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 DIAPH2-AS1Q14236 149 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 FXYD3Q14802 87 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 GOLT1AQ6ZVE7 132 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 CCDC42Q96M95 316 aa-0.77□□□□□ -2.53
SNORA40.9-201ENST00000515895 TANC1Q9C0D5 1861 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 CTTNBP2Q8WZ74 1663 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 DSPPQ9NZW4 1301 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 GYPBP06028 91 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 TMBIM6P55061 237 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 ARPP19P56211 112 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 NEDD8Q15843 81 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 VMA21Q3ZAQ7 101 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 DEFB132Q7Z7B7 95 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 LINC00269Q8N2A0 174 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 C5orf56Q8N8D9 126 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 MAP1LC3BQ9GZQ8 125 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 ENY2Q9NPA8 101 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 SPTBN2O15020 2390 aa-0.78□□□□□ -2.53
SNORA40.9-201ENST00000515895 SPAG17Q6Q759 2223 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 MAP1BP46821 2468 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 A0A096LNT2 108 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 NBDYA0A0U1RRE5 68 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 RPP14O95059 124 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 SNRPD3P62318 126 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 IDO2Q6ZQW0 420 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 IFT20Q8IY31 132 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 DDI1Q8WTU0 396 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 MRPL35Q9NZE8 188 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 ASB4Q9Y574 426 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 ATG2AQ2TAZ0 1938 aa-0.79□□□□□ -2.54
SNORA40.9-201ENST00000515895 CCDC144AA2RUR9 1427 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 NINQ8N4C6 2090 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 LOC101927531A0A1B0GV80 90 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 K7ERJ3 54 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 CETN3O15182 167 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 LYPLA2O95372 231 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 RPS17P08708 135 aaKnown RBP-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 CXCL1P09341 107 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 COTL1Q14019 142 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 FAM216BQ8N7L0 139 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 AP1S3Q96PC3 154 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 SIGMAR1Q99720 223 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 PDZD2O15018 2839 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 CHD6Q8TD26 2715 aa-0.8□□□□□ -2.54
SNORA40.9-201ENST00000515895 TRAV5A0A0B4J249 113 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 HMGB3O15347 200 aaKnown RBP-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 HIST1H2BKO60814 126 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 HIST1H2BJP06899 126 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 INSL3P51460 131 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 HACD4Q5VWC8 232 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 BTF3L4Q96K17 158 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 PRR15LQ9BU68 103 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 EFCAB11Q9BUY7 163 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 NMNAT1Q9HAN9 279 aaPredicted RBP-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 TMEM14BQ9NUH8 114 aa-0.81□□□□□ -2.54
SNORA40.9-201ENST00000515895 TRPM1Q7Z4N2 1603 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 NISCHQ9Y2I1 1504 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 F5P12259 2224 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 HIGD1CA8MV81 97 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 BANF1O75531 89 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 CEBPGP53567 150 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 LSM6P62312 80 aaKnown RBP-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 KLKP1Q107X0 134 aa-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 TAF1AQ15573 450 aaPredicted RBP-0.82□□□□□ -2.54
SNORA40.9-201ENST00000515895 Q5XG85 94 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms