RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 RBBP6Q7Z6E9 1792 aaKnown RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 FLNBO75369 2602 aaKnown RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 A0A0J9YY99 117 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 A6NN06 94 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 IGHV3-33P01772 117 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 EVI2AP22794 236 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 ETV6P41212 452 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 OMPP47874 163 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 RANP62826 216 aaKnown RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 ESPL1Q14674 2120 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 EIF5AL1Q6IS14 154 aaKnown RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 IDO2Q6ZQW0 420 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 LRRC18Q8N456 261 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 OR5D16Q8NGK9 328 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 POP5Q969H6 163 aaKnown RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 LIMD2Q9BT23 127 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 PARD6GQ9BYG4 376 aaPredicted RBP-0.36□□□□□ -2.47
MBD4-210ENST00000515266 POPDC3Q9HBV1 291 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 OBSL1O75147 1896 aa-0.36□□□□□ -2.47
MBD4-210ENST00000515266 COL12A1Q99715 3063 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 ATRQ13535 2644 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 C9orf170A2RU37 121 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 PDE6DO43924 150 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 IGHV3-30P01768 117 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 IGHV3-30-5P0DP03 117 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 HLA-EP13747 358 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 RPS3P23396 243 aaKnown RBP eCLIP-0.37□□□□□ -2.47
MBD4-210ENST00000515266 UBE2BP63146 152 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 ZNF56Q15929 161 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 RRN3P1Q2M238 152 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 TMEM14EPQ6UXP3 125 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 OR4K15Q8NH41 348 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 GRPEL2Q8TAA5 225 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 CHCHD1Q96BP2 118 aaKnown RBP-0.37□□□□□ -2.47
MBD4-210ENST00000515266 ZHX1-C8orf76Q96EF9 292 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 MALSU1Q96EH3 234 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 HYLS1Q96M11 299 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 NPCDR1Q9BY65 106 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 IMUPQ9GZP8 106 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 PRELID3BQ9Y3B1 194 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 GVINP1Q7Z2Y8 2422 aa-0.37□□□□□ -2.47
MBD4-210ENST00000515266 NCOA1Q15788 1441 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 PTPRDP23468 1912 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 hDV103S1A0JD37 113 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 LYRM1O43325 122 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 GGCTO75223 188 aaKnown RBP-0.38□□□□□ -2.47
MBD4-210ENST00000515266 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
MBD4-210ENST00000515266 IGLV1-51P01701 117 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 TCRBP04435 133 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 PIGPP57054 158 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 MYL6P60660 151 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 HIST1H3AP68431 136 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 H3F3AP84243 136 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 AESQ08117 197 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 MIR22HGQ0VDD5 57 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 KRTAP20-2Q3LI61 65 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 FOXI2Q6ZQN5 318 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 TRAPPC5Q8IUR0 188 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.38□□□□□ -2.47
MBD4-210ENST00000515266 LINC00208Q96KT6 92 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 TEX37Q96LM6 180 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 ZNF714Q96N38 554 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 PRR15LQ9BU68 103 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 ENY2Q9NPA8 101 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 NAT8BQ9UHF3 227 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 RTL1A6NKG5 1358 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 NINQ8N4C6 2090 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 CSPG4Q6UVK1 2322 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 FMN1Q68DA7 1419 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 MIA2Q96PC5 1412 aa-0.38□□□□□ -2.47
MBD4-210ENST00000515266 DSPP15924 2871 aaKnown RBP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 CNOT1A5YKK6 2376 aaKnown RBP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 DUXBA0A1W2PPF3 345 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 A0A1W2PRS3 328 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 TAX1BP3O14907 124 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 CST8O60676 142 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 GYPBP06028 91 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 SPRR2DP22532 72 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 DYNLT3P51808 116 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 SNRPD3P62318 126 aaKnown RBP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 KLRD1Q13241 179 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 EDDM3AQ14507 147 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 ARL5BQ96KC2 179 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 AP1S3Q96PC3 154 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 TRIM4Q9C037 500 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 CST11Q9H112 138 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 CACYBPQ9HB71 228 aaKnown RBP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 TGP01266 2768 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 MYLKQ15746 1914 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 FAT2Q9NYQ8 4349 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 MYO5AQ9Y4I1 1855 aaKnown RBP-0.39□□□□□ -2.47
MBD4-210ENST00000515266 DSPPQ9NZW4 1301 aa-0.39□□□□□ -2.47
MBD4-210ENST00000515266 USP9YO00507 2555 aaPredicted RBP-0.4□□□□□ -2.47
MBD4-210ENST00000515266 BPTFQ12830 3046 aa-0.4□□□□□ -2.47
MBD4-210ENST00000515266 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
MBD4-210ENST00000515266 COL24A1Q17RW2 1714 aa-0.4□□□□□ -2.47
MBD4-210ENST00000515266 TRBV19A0A075B6N1 114 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms