RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	TNS1	Q9HBL0	1735 aa	Known RBP	4.01	□□□□□ -1.77
TUSC3-205	ENST00000507316	ARHGAP21	Q5T5U3	1957 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	KIAA1549	Q9HCM3	1950 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	MYBPHL	A2RUH7	354 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	LINC01546	A6NGU7	62 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	CGB1	A6NKQ9	187 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316		K7EM74	188 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	CDX4	O14627	284 aa	Predicted RBP	4	□□□□□ -1.77
TUSC3-205	ENST00000507316	CXCL13	O43927	109 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	ARL14EPL	P0DKL9	152 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	CA6	P23280	308 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	LMO2	P25791	158 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	EMD	P50402	254 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	FXYD4	P59646	89 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	HILS1	P60008	231 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	PCBD1	P61457	104 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	RPS18	P62269	152 aa	Known RBP	4	□□□□□ -1.77
TUSC3-205	ENST00000507316	ZNF56	Q15929	161 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	SPANXN5	Q5MJ07	72 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	SDIM1	Q6ZPB5	146 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316		Q6ZQT7	251 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316		Q6ZSR3	168 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	NDUFA11	Q86Y39	141 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	EXOC3-AS1	Q8N2X6	119 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	C2orf48	Q96LS8	159 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	IGF2BP2-AS1	Q96M15	143 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	S1PR3	Q99500	378 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	KRTAP1-5	Q9BYS1	174 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	RETN	Q9HD89	108 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	COL4A2	P08572	1712 aa		4	□□□□□ -1.77
TUSC3-205	ENST00000507316	IGLV1-36	A0A0B4J1U3	117 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	C5orf63	A6NC05	138 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	LINC00473	A8K010	186 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	LYRM9	A8MSI8	78 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	HIGD1C	A8MV81	97 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	NPIPB11	E5RHQ5	1161 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	LMO7DN	F2Z398	122 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316		H3BVH4	76 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316		K7ERJ3	54 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	UPK2	O00526	184 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	SPINT2	O43291	252 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	IGLV3-27	P01718	113 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	APOH	P02749	345 aa	Predicted RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	COX6C	P09669	75 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	GP1BB	P13224	206 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	FBXW4	P57775	412 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	POLR2L	P62875	67 aa	Known RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	CACNG7	P62955	275 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	RPL18A	Q02543	176 aa	Known RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	KISS1	Q15726	138 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	FAM104B	Q5XKR9	115 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	ZNF793	Q6ZN11	406 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	RNF144B	Q7Z419	303 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	PCP2	Q8IVA1	136 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	TDH	Q8IZJ6	230 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	VKORC1L1	Q8N0U8	176 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	C11orf44	Q8N8P7	122 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	MDS2	Q8NDY4	140 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	GATAD1	Q8WUU5	269 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	CNRIP1	Q96F85	164 aa	Predicted RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	VSIG2	Q96IQ7	327 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	C18orf15	Q96N68	181 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	FAM173A	Q9BQD7	235 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	DPH3P1	Q9H4G8	78 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	RPP21	Q9H633	154 aa	Known RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	PLEKHA3	Q9HB20	300 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	CALY	Q9NYX4	217 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	PEMT	Q9UBM1	199 aa		3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	PHF3	Q92576	2039 aa	Known RBP	3.99	□□□□□ -1.77
TUSC3-205	ENST00000507316	TRBV6-6	A0A0A6YYG2	114 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316		A0A0B4J2C4	111 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316		A0A1B0GTH9	108 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	C19orf71	A6NCJ1	209 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	USP17L23	D6RBM5	183 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316		K7EQS6	105 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	CCL16	O15467	120 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	PGLYRP1	O75594	196 aa	Predicted RBP	3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	FKBP2	P26885	142 aa	Known RBP	3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	CFHR3	Q02985	330 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	PAPPA-AS1	Q5QFB9	102 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	LINC00596	Q86U02	117 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	LINC00311	Q8N616	119 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	RNF182	Q8N6D2	247 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	OR8A1	Q8NGG7	326 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	NT5C	Q8TCD5	201 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	PRSS22	Q9GZN4	317 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	PRO1854	Q9UHT4	67 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	HHLA3	Q9XRX5	114 aa		3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	F11R	Q9Y624	299 aa	Known RBP	3.98	□□□□□ -1.77
TUSC3-205	ENST00000507316	PTPRS	Q13332	1948 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316	EML5	Q05BV3	1969 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316	TRBV6-1	A0A0K0K1D8	114 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316	PMS2P5	A8MQ11	134 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316		H3BP45	60 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316		K7EMI3	77 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316		M0R1B8	84 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316	PEX7	O00628	323 aa		3.97	□□□□□ -1.77
TUSC3-205	ENST00000507316	SPINK4	O60575	86 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms