RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 A0A087X0K7 114 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 TMEM8BA6NDV4 472 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
CMSS1-208ENST00000496116 BMI1P35226 326 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 SSTP61278 116 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 SPATA45Q537H7 98 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 PRR31Q5SQ13 230 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 SNHG12Q9BXW3 62 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 IGHV3OR16-8A0A075B7F1 116 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 LINC01548A6NM66 108 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 EREGO14944 169 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 SH2D1AO60880 128 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 LINC00614P0C842 121 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 CLEC2AQ6UVW9 174 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
CMSS1-208ENST00000496116 ITPR1Q14643 2758 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 M0QZK8 103 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
CMSS1-208ENST00000496116 ATP5G2Q06055 141 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 LCN12Q6JVE5 192 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 KLHDC1Q8N7A1 406 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 C10orf105Q8TEF2 133 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 METTL26Q96S19 204 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 CSMD1Q96PZ7 3565 aa8.58□□□□□ -1.04
CMSS1-208ENST00000496116 AKAP6Q13023 2319 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV3OR16-10A0A075B7F0 116 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 TRAV41A0A0B4J266 112 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 CTRLP40313 264 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 TMEM70Q9BUB7 260 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 MEGF9Q9H1U4 602 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 RBAKDNA6NC62 111 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 C2orf70A6NJV1 201 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-208ENST00000496116 ATP5J2P56134 94 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
CMSS1-208ENST00000496116 VGLL1Q99990 258 aa8.57□□□□□ -1.04
CMSS1-208ENST00000496116 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 M0QZ24 198 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 IGHG4P01861 327 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 SRSF2Q01130 221 aaKnown RBP8.56□□□□□ -1.04
CMSS1-208ENST00000496116 IGFL4Q6B9Z1 124 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 BRD3OSQ6XYD6 125 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 Q8TAT8 98 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 UQCR10Q9UDW1 63 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 C20orf202A1L168 122 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 CLPSL1A2RUU4 121 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 RNF224P0DH78 156 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 HLA-DMBP28068 263 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 PIFOQ8TCI5 191 aa8.56□□□□□ -1.04
CMSS1-208ENST00000496116 CRXO43186 299 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-208ENST00000496116 SVEP1Q4LDE5 3571 aa8.55□□□□□ -1.04
CMSS1-208ENST00000496116 FABP5P3A8MUU1 101 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 TRGV3P03979 118 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 FER1L6-AS1Q8NA97 138 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 CLEC5AQ9NY25 188 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 HSPB8Q9UJY1 196 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 PKD1L2Q7Z442 2459 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 TRAV9-2A0A087WT02 112 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 IGF1P05019 195 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 CSN3P07498 182 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
CMSS1-208ENST00000496116 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
CMSS1-208ENST00000496116 ASH1LQ9NR48 2969 aaKnown RBP8.54□□□□□ -1.04
CMSS1-208ENST00000496116 PIEZO1Q92508 2521 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV4-30-2A0A087WSY4 118 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 H3BUA1 57 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 SYS1-DBNDD2H3BUS1 97 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ORM1P02763 201 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 MSMBP08118 114 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 IGHV4-38-2P0DP08 117 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ARL3P36405 182 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
CMSS1-208ENST00000496116 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
CMSS1-208ENST00000496116 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms