RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PLXNA4Q9HCM2 1894 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 PRORSD1PA6NEY8 169 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 EIF3IQ13347 325 aaKnown RBP1.46□□□□□ -2.18
SSR3-208ENST00000496050 TMEM35BQ8NCS4 154 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 ISOC1Q96CN7 298 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 TMEM138Q9NPI0 162 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 ASB4Q9Y574 426 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 NUBP2Q9Y5Y2 271 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 FHAD1B1AJZ9 1412 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 RTL9Q8NET4 1388 aa1.46□□□□□ -2.18
SSR3-208ENST00000496050 KIAA1549Q9HCM3 1950 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 TRDV1A0A1B0GX56 115 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 SCGB1A1P11684 91 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 TOMM20LQ6UXN7 152 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 FAM216BQ8N7L0 139 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 OR10AG1Q8NH19 301 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 MCEEQ96PE7 176 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 RNF11Q9Y3C5 154 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 TRAPPC8Q9Y2L5 1435 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 RFX7Q2KHR2 1363 aa1.45□□□□□ -2.18
SSR3-208ENST00000496050 KIAA1107Q9UPP5 1409 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 A0A1W2PRE2 83 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 TSTD3H0UI37 97 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 NCR3O14931 201 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 HMGN1P05114 100 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 CIRBPQ14011 172 aaKnown RBP1.44□□□□□ -2.18
SSR3-208ENST00000496050 CCDC32Q9BV29 185 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 LRTM1Q9HBL6 345 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 SPANXA1Q9NS26 97 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 GINS2Q9Y248 185 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 HSPB11Q9Y547 144 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 ALPK3Q96L96 1907 aa1.44□□□□□ -2.18
SSR3-208ENST00000496050 COL24A1Q17RW2 1714 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 E7EQ34 232 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 KPNA4O00629 521 aaPredicted RBP1.43□□□□□ -2.18
SSR3-208ENST00000496050 MT-ND6P03923 174 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 TMEM128Q5BJH2 165 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 OTORQ9NRC9 128 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 CPDO75976 1380 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 PKD1L2Q7Z442 2459 aa1.43□□□□□ -2.18
SSR3-208ENST00000496050 MGAMO43451 1857 aa1.42□□□□□ -2.18
SSR3-208ENST00000496050 C9orf170A2RU37 121 aa1.42□□□□□ -2.18
SSR3-208ENST00000496050 S100GP29377 79 aa1.42□□□□□ -2.18
SSR3-208ENST00000496050 RPS28P62857 69 aaKnown RBP1.42□□□□□ -2.18
SSR3-208ENST00000496050 ANGPTL5Q86XS5 388 aa1.42□□□□□ -2.18
SSR3-208ENST00000496050 SKA2Q8WVK7 121 aaPredicted RBP1.42□□□□□ -2.18
SSR3-208ENST00000496050 TCEAL2Q9H3H9 227 aaPredicted RBP1.42□□□□□ -2.18
SSR3-208ENST00000496050 LAMTOR2Q9Y2Q5 125 aa1.42□□□□□ -2.18
SSR3-208ENST00000496050 NCOA6Q14686 2063 aaPredicted RBP1.42□□□□□ -2.18
SSR3-208ENST00000496050 HEATR1Q9H583 2144 aaKnown RBP1.42□□□□□ -2.18
SSR3-208ENST00000496050 C5orf67F2Z3F1 127 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 GABARAPH6UMI1 98 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 KLF7O75840 302 aaPredicted RBP1.41□□□□□ -2.18
SSR3-208ENST00000496050 OR4B1Q8NGF8 309 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 RMND5BQ96G75 393 aaPredicted RBP1.41□□□□□ -2.18
SSR3-208ENST00000496050 AIF1LQ9BQI0 150 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 NAT8BQ9UHF3 227 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 HSPB8Q9UJY1 196 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 COL1A1P02452 1464 aaPredicted RBP1.41□□□□□ -2.18
SSR3-208ENST00000496050 CACNA1AO00555 2505 aa1.41□□□□□ -2.18
SSR3-208ENST00000496050 ARAP1Q96P48 1450 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 FAM107AO95990 144 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 PPYP01298 95 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 BCL2P10415 239 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 FABP2P12104 132 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 GTF2A1P52655 376 aaPredicted RBP1.4□□□□□ -2.19
SSR3-208ENST00000496050 OR9Q1Q8NGQ5 310 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 MAFIPQ8WZ33 124 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 ZC2HC1AQ96GY0 325 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 CARD19Q96LW7 228 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 EFCAB11Q9BUY7 163 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 SPANXCQ9NY87 97 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 TPRKBQ9Y3C4 175 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 SIP14410 1827 aa1.4□□□□□ -2.19
SSR3-208ENST00000496050 A0A096LPI6 279 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 JMJD7-PLA2G4BH0Y9G9 81 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 M0QZK8 103 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 ARPC5O15511 151 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 FABP4P15090 132 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 SMCO1Q147U7 214 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 SAMD13Q5VXD3 122 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 GRPEL2Q8TAA5 225 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 THEM6Q8WUY1 208 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 PSMF1Q92530 271 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 JPT1Q9UK76 154 aa1.39□□□□□ -2.19
SSR3-208ENST00000496050 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
SSR3-208ENST00000496050 H7BYZ3 331 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 S100A11P31949 105 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 SDC2P34741 201 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 NDUFA6P56556 154 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 MRPS36P82909 103 aaKnown RBP1.38□□□□□ -2.19
SSR3-208ENST00000496050 VMA21Q3ZAQ7 101 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 CCDC115Q96NT0 180 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 OR4C12Q96R67 309 aa1.38□□□□□ -2.19
SSR3-208ENST00000496050 ARHGEF10O15013 1369 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 A0A1B0GX51 115 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 ARL5CA6NH57 179 aa1.37□□□□□ -2.19
SSR3-208ENST00000496050 OR5H6Q8NGV6 325 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms