RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 FOXC1Q12948 553 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 RNASE8Q8TDE3 154 aaKnown RBP10.19□□□□□ -0.78
PTPN7-217ENST00000495688 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
PTPN7-217ENST00000495688 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 NDUFA3O95167 84 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 CT45A10P0DMU9 189 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 HLA-DMBP28068 263 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 PCP4P48539 62 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 FA2HQ7L5A8 372 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 OR11H6Q8NGC7 330 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 RNF24Q9Y225 148 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 SH2D1AO60880 128 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 BVES-AS1Q5T3Y7 98 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 LINC01545Q5VT33 79 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 NPBQ8NG41 125 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 AAMDCQ9H7C9 122 aa10.18□□□□□ -0.78
PTPN7-217ENST00000495688 LOC105371242A0A075B767 164 aa10.17□□□□□ -0.78
PTPN7-217ENST00000495688 MFAP4P55083 255 aa10.17□□□□□ -0.78
PTPN7-217ENST00000495688 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
PTPN7-217ENST00000495688 ARPC1AQ92747 370 aa10.17□□□□□ -0.78
PTPN7-217ENST00000495688 SIGLEC8Q9NYZ4 499 aa10.17□□□□□ -0.78
PTPN7-217ENST00000495688 TMEM189A5PLL7 270 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 NPIPB5A8MRT5 1133 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-217ENST00000495688 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 VGLL1Q99990 258 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 C21orf62Q9NYP8 219 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 EGR2P11161 476 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-217ENST00000495688 VAMP3Q15836 100 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 RAB1BQ9H0U4 201 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 PPP1R14DQ9NXH3 145 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 CHD8Q9HCK8 2581 aa10.16□□□□□ -0.78
PTPN7-217ENST00000495688 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 ZNF562Q6V9R5 426 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 SMAD5-AS1Q9Y6J3 95 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 SPTAN1Q13813 2472 aaKnown RBP10.15□□□□□ -0.78
PTPN7-217ENST00000495688 SPTBN4Q9H254 2564 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 IGHV2-70DA0A0C4DH43 119 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 CBY3A6NI87 242 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 K7ENP7 123 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 CEACAM3P40198 252 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 CSN1S1P47710 185 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 PDE6HQ13956 83 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 FAM104BQ5XKR9 115 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 ZNF493Q6ZR52 646 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 PRELID3AQ96N28 172 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 PRR25Q96S07 402 aa10.15□□□□□ -0.78
PTPN7-217ENST00000495688 NCOR2Q9Y618 2525 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 CCL21O00585 134 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 IGHG4P01861 327 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 CTSGP08311 255 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 PRTN3P24158 256 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
PTPN7-217ENST00000495688 Q6AWC8 147 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 MSRB1Q9NZV6 116 aa10.14□□□□□ -0.79
PTPN7-217ENST00000495688 A0A1B0GW15 77 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 C2orf91Q6ZV80 131 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 GAS8-AS1O95177 125 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 RHOGP84095 191 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 WFDC3Q8IUB2 231 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 DEFB125Q8N687 156 aa10.13□□□□□ -0.79
PTPN7-217ENST00000495688 NPYP01303 97 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 TWIST1Q15672 202 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 TIMD4Q96H15 378 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 HIVEP3Q5T1R4 2406 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 NDUFS7O75251 213 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 COX8AP10176 69 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 RPL7P18124 248 aaKnown RBP10.12□□□□□ -0.79
PTPN7-217ENST00000495688 ZFP36P26651 326 aaKnown RBP10.12□□□□□ -0.79
PTPN7-217ENST00000495688 GPR183P32249 361 aa10.12□□□□□ -0.79
PTPN7-217ENST00000495688 IGHV3-66A0A0C4DH42 116 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 CACNG7P62955 275 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 PSG9Q00887 426 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 ERCC8Q13216 396 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 C12orf54Q6X4T0 127 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 U3KQK5 164 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 IGHV3OR16-13A0A075B7E8 117 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 IGHV3-74A0A0B4J1X5 117 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 M0R1W7 72 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 PPIFP30405 207 aaKnown RBP10.11□□□□□ -0.79
PTPN7-217ENST00000495688 CKS2P33552 79 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 RBX1P62877 108 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 HIST1H1AQ02539 215 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms