RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 ACOT7LQ6ZUV0 252 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 C2orf50Q96LR7 162 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 HIGD1AQ9Y241 93 aa8.61□□□□□ -1.03
TREX1-204ENST00000492235 SMCO3A2RU48 225 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 H3BP45 60 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 RLN2P04090 185 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 OR5G3P0C626 314 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 XGP55808 180 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
TREX1-204ENST00000492235 CYCSP99999 105 aaKnown RBP8.6□□□□□ -1.03
TREX1-204ENST00000492235 SPANXN5Q5MJ07 72 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 Q5VSD8 79 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 CYP2G1PQ6ZSU1 146 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 RPUSD4Q96CM3 377 aaKnown RBP8.6□□□□□ -1.03
TREX1-204ENST00000492235 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
TREX1-204ENST00000492235 PSENENQ9NZ42 101 aa8.6□□□□□ -1.03
TREX1-204ENST00000492235 RCL1Q9Y2P8 373 aaKnown RBP8.6□□□□□ -1.03
TREX1-204ENST00000492235 C7orf66A4D0T2 115 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 SSSCA1O60232 199 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 HYPMO75409 117 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 MBPP02686 304 aaPredicted RBP8.59□□□□□ -1.03
TREX1-204ENST00000492235 PVALBP20472 110 aaPredicted RBP8.59□□□□□ -1.03
TREX1-204ENST00000492235 IL15RAQ13261 267 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 TMEM14EPQ6UXP3 125 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 Q6ZRN7 208 aaPredicted RBP8.59□□□□□ -1.03
TREX1-204ENST00000492235 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 GGACTQ9BVM4 153 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 GSKIPQ9P0R6 139 aa8.59□□□□□ -1.03
TREX1-204ENST00000492235 A0A087X0K7 114 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 H3BNG1 76 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
TREX1-204ENST00000492235 LINC00869P0C866 280 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 GFI1BQ5VTD9 330 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 FRZBQ92765 325 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 NMES1Q9C002 83 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
TREX1-204ENST00000492235 A0A096LPF7 62 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 PMS2P5A8MQ11 134 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 FAM25EA8MYX2 175 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 J3KRW8 73 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 L7N2F9 121 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 CCSO14618 274 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 EREGO14944 169 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 SCGB1D2O95969 90 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 ERVFC1-1P60608 527 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 VAMP2P63027 116 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 OR10P1Q8NGE3 313 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 ARL6Q9H0F7 186 aa8.57□□□□□ -1.04
TREX1-204ENST00000492235 PRAC2D3DTV9 90 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 K7EPK0 472 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 MRPS12O15235 138 aaKnown RBP8.56□□□□□ -1.04
TREX1-204ENST00000492235 SIVA1O15304 175 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 PLP1P60201 277 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 SELENOTP62341 195 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 Q6ZTI0 123 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 C11orf1Q9H5F2 150 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 LYRM2Q9NU23 88 aaPredicted RBP8.56□□□□□ -1.04
TREX1-204ENST00000492235 TNFRSF18Q9Y5U5 241 aa8.56□□□□□ -1.04
TREX1-204ENST00000492235 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 TRAV12-3A0A0B4J271 114 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
TREX1-204ENST00000492235 PET100P0DJ07 73 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 RRAS2P62070 204 aaPredicted RBP8.55□□□□□ -1.04
TREX1-204ENST00000492235 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 LCN15Q6UWW0 184 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 PATE2Q6UY27 113 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 ZNF331Q9NQX6 463 aaPredicted RBP8.55□□□□□ -1.04
TREX1-204ENST00000492235 MGAT4CQ9UBM8 478 aa8.55□□□□□ -1.04
TREX1-204ENST00000492235 LSM5Q9Y4Y9 91 aaKnown RBP8.55□□□□□ -1.04
TREX1-204ENST00000492235 UBR4Q5T4S7 5183 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 H3BTX0 84 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 GOSR2O14653 212 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 SSNA1O43805 119 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 CCNKO75909 580 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 IFNA5P01569 189 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 DNAH10OSP0CZ25 163 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 CXCL2P19875 107 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 HBG1P69891 147 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 HBG2P69892 147 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 RAB32Q13637 225 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 RGS21Q2M5E4 152 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 S100A7AQ86SG5 101 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 STX12Q86Y82 276 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 ASB13Q8WXK3 278 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
TREX1-204ENST00000492235 RNF24Q9Y225 148 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms