RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 DNAH3Q8TD57 4116 aa-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 OR5D16Q8NGK9 328 aa-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 HYLS1Q96M11 299 aa-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 CMSS1Q9BQ75 279 aaKnown RBP-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 MRPS26Q9BYN8 205 aaKnown RBP-1.46□□□□□ -2.64
CBWD1-216ENST00000489272 SPTBN2O15020 2390 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 SPTA1P02549 2419 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 CNIH1O95406 144 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 COX6A2Q02221 97 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 RRN3P1Q2M238 152 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 IAH1Q2TAA2 248 aaPredicted RBP-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 BCL2L15Q5TBC7 163 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 C5orf17Q8NAS9 161 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 BORCS7Q96B45 105 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 MALSU1Q96EH3 234 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 C8orf76Q96K31 380 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 IMUPQ9GZP8 106 aa-1.47□□□□□ -2.64
CBWD1-216ENST00000489272 NUP98P52948 1817 aa-1.47□□□□□ -2.65
CBWD1-216ENST00000489272 hADV38S2A0JD32 116 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 FAM159BA6NKW6 160 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 ETV6P41212 452 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 DEFA3P59666 94 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 TMED1Q13445 227 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 ZNF56Q15929 161 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 KLK9Q2XQG4 91 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 LRRC18Q8N456 261 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 VPS29Q9UBQ0 182 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 PKHD1L1Q86WI1 4243 aa-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 TNRC18O15417 2968 aaPredicted RBP-1.48□□□□□ -2.65
CBWD1-216ENST00000489272 A0A096LNT2 108 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 C9orf170A2RU37 121 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 HLA-EP13747 358 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 EVI2AP22794 236 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 CHCHD1Q96BP2 118 aaKnown RBP-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 NPCDR1Q9BY65 106 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 PARD6GQ9BYG4 376 aaPredicted RBP-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 GLTPQ9NZD2 209 aa-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 SPTBN1Q01082 2364 aaKnown RBP-1.49□□□□□ -2.65
CBWD1-216ENST00000489272 DNAH2Q9P225 4427 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 ABCA1O95477 2261 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 ATG2AQ2TAZ0 1938 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 KPNA3O00505 521 aaPredicted RBP-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 IGHV3-30P01768 117 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 IGHV3-30-5P0DP03 117 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 MIR22HGQ0VDD5 57 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 LINC00208Q96KT6 92 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 ATP6V1G3Q96LB4 118 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 POPDC3Q9HBV1 291 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 UQCC1Q9NVA1 299 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 TANC1Q9C0D5 1861 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 AKAP13Q12802 2813 aa-1.5□□□□□ -2.65
CBWD1-216ENST00000489272 SPTBN4Q9H254 2564 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 PCNX1Q96RV3 2341 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 KIF1BO60333 1816 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 SPRR2EP22531 72 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 SPRR2AP35326 72 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 PIGPP57054 158 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 UBE2BP63146 152 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 KRTAP6-2Q3LI66 62 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 CCDC122Q5T0U0 273 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 FOXI2Q6ZQN5 318 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 IDO2Q6ZQW0 420 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 NAT14Q8WUY8 206 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 RTL1A6NKG5 1358 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 ESPL1Q14674 2120 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 FMN1Q68DA7 1419 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 UNC13BO14795 1591 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 LAMC3Q9Y6N6 1575 aa-1.51□□□□□ -2.65
CBWD1-216ENST00000489272 SERPINA6P08185 405 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 RPS3P23396 243 aaKnown RBP eCLIP-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 OMPP47874 163 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 SPAG11BQ08648 103 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 OR4K15Q8NH41 348 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 ZHX1-C8orf76Q96EF9 292 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 TEX37Q96LM6 180 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 RNASE7Q9H1E1 156 aaKnown RBP-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 VPS13DQ5THJ4 4388 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 SNAPC4Q5SXM2 1469 aa-1.52□□□□□ -2.65
CBWD1-216ENST00000489272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 hDV103S1A0JD37 113 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 CLDN24A6NM45 220 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 TAX1BP3O14907 124 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 DEFB109BQ30KR1 87 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 WDR87Q6ZQQ6 2873 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 CLDN22Q8N7P3 220 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 GUCA1BQ9UMX6 200 aa-1.53□□□□□ -2.65
CBWD1-216ENST00000489272 C2CD3Q4AC94 2353 aa-1.54□□□□□ -2.66
CBWD1-216ENST00000489272 GGCTO75223 188 aaKnown RBP-1.54□□□□□ -2.66
CBWD1-216ENST00000489272 F5P12259 2224 aa-1.55□□□□□ -2.66
CBWD1-216ENST00000489272 PLECQ15149 4684 aaKnown RBP-1.55□□□□□ -2.66
CBWD1-216ENST00000489272 A0A087WUJ7 227 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 A0A1W2PRS3 328 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 TMEM256-PLSCR3K7ERE1 68 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 PDE6DO43924 150 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 IFNA16P05015 189 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 DYNLT3P51808 116 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 Q5XG85 94 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 DEFB132Q7Z7B7 95 aa-1.56□□□□□ -2.66
CBWD1-216ENST00000489272 GRPEL2Q8TAA5 225 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms