RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 DLEU1O43261 78 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 GAS8-AS1O95177 125 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 LINC00614P0C842 121 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 TSPOP30536 169 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 MSRB2Q9Y3D2 182 aa9.9□□□□□ -0.83
CLIC4-202ENST00000488683 M0R1W7 72 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 CEACAM3P40198 252 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 PSG3Q16557 428 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 SOX21Q9Y651 276 aaPredicted RBP9.89□□□□□ -0.83
CLIC4-202ENST00000488683 GPR183P32249 361 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 LYZL1Q6UWQ5 148 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
CLIC4-202ENST00000488683 AMN1Q8IY45 258 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 TMEM70Q9BUB7 260 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 SMAD5-AS1Q9Y6J3 95 aa9.89□□□□□ -0.83
CLIC4-202ENST00000488683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.89□□□□□ -0.832e-11■■■■■ 46.5
CLIC4-202ENST00000488683 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.88□□□□□ -0.83
CLIC4-202ENST00000488683 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 HAX1O00165 279 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
CLIC4-202ENST00000488683 TMEM11P17152 192 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 TMEM219Q86XT9 240 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 POLQO75417 2590 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 TRBV6-1A0A0K0K1D8 114 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 IFI27P40305 119 aaPredicted RBP9.88□□□□□ -0.83
CLIC4-202ENST00000488683 UQCRFS1P47985 274 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 KLRB1Q12918 225 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 ZNF562Q6V9R5 426 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 C21orf62Q9NYP8 219 aa9.88□□□□□ -0.83
CLIC4-202ENST00000488683 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 A0A1B0GUT8 65 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 SYS1-DBNDD2H3BUS1 97 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 SPRY2O43597 315 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 TCF21O43680 179 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 Q8N6K4 173 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 D6R8Y8 96 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 CTSGP08311 255 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 MFAP4P55083 255 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
CLIC4-202ENST00000488683 SH2D1AO60880 128 aa9.86□□□□□ -0.83
CLIC4-202ENST00000488683 TTC9CQ8N5M4 171 aa9.86□□□□□ -0.83
CLIC4-202ENST00000488683 CSPG4Q6UVK1 2322 aa9.86□□□□□ -0.83
CLIC4-202ENST00000488683 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
CLIC4-202ENST00000488683 LYPD1Q8N2G4 141 aa9.86□□□□□ -0.83
CLIC4-202ENST00000488683 PKD1L2Q7Z442 2459 aa9.86□□□□□ -0.83
CLIC4-202ENST00000488683 C19orf84I3L1E1 186 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 J3KRW8 73 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 IGHG4P01861 327 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 DEFB1P60022 68 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 C21orf62-AS1Q17RA5 79 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 MPV17L2Q567V2 206 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 COL5A1-AS1Q5SY13 56 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 OR8A1Q8NGG7 326 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 NEU4Q8WWR8 484 aaPredicted RBP9.85□□□□□ -0.83
CLIC4-202ENST00000488683 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
CLIC4-202ENST00000488683 C15orf32Q32M92 178 aa9.85□□□□□ -0.83
CLIC4-202ENST00000488683 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
CLIC4-202ENST00000488683 TRAV30A0A087WSZ9 112 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 K7EQM0 130 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 CLEC3BP05452 202 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 PRSS3P2Q8NHM4 247 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 RNF24Q9Y225 148 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 CRXO43186 299 aaPredicted RBP9.84□□□□□ -0.83
CLIC4-202ENST00000488683 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 Q8N9W7 124 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 ZNF48Q96MX3 618 aaPredicted RBP9.84□□□□□ -0.83
CLIC4-202ENST00000488683 BPESC1Q9GZL8 116 aa9.84□□□□□ -0.83
CLIC4-202ENST00000488683 A0A087X0K7 114 aa9.84□□□□□ -0.84
CLIC4-202ENST00000488683 GATA1P15976 413 aaPredicted RBP9.84□□□□□ -0.84
CLIC4-202ENST00000488683 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.84
CLIC4-202ENST00000488683 DTX2Q86UW9 622 aa9.84□□□□□ -0.84
CLIC4-202ENST00000488683 AJUBAQ96IF1 538 aa9.84□□□□□ -0.84
CLIC4-202ENST00000488683 SIRPDQ9H106 197 aa9.84□□□□□ -0.84
CLIC4-202ENST00000488683 DOPEY2Q9Y3R5 2298 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 CT45A10P0DMU9 189 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 SAA4P35542 130 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 PDE6HQ13956 83 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 EBI3Q14213 229 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 CCDC144NLQ6NUI1 221 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 ZNF575Q86XF7 245 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 ZFYVE26Q68DK2 2539 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 ORM1P02763 201 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 EVI2AP22794 236 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 TWIST1Q15672 202 aa9.83□□□□□ -0.84
CLIC4-202ENST00000488683 USP9XQ93008 2570 aaPredicted RBP9.83□□□□□ -0.84
CLIC4-202ENST00000488683 A0A096LNJ9 63 aa9.82□□□□□ -0.84
CLIC4-202ENST00000488683 RIGQ13278 110 aa9.82□□□□□ -0.84
CLIC4-202ENST00000488683 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms