RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RNF224P0DH78 156 aa14.01□□□□□ -0.17
PDLIM7-207ENST00000486828 CTRLP40313 264 aa14.01□□□□□ -0.17
PDLIM7-207ENST00000486828 UNQ5815/PRO19632Q6UWF5 114 aa14.01□□□□□ -0.17
PDLIM7-207ENST00000486828 TMUB1Q9BVT8 246 aa14.01□□□□□ -0.17
PDLIM7-207ENST00000486828 CT45A10P0DMU9 189 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 S100A7P31151 101 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 ZNF502Q8TBZ5 544 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 C8orf49Q96NF6 230 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 TENM4Q6N022 2769 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 NPFFO15130 113 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 ATP6V0E1O15342 81 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 RIGQ13278 110 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 ECSCRQ19T08 205 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 Q6AWC8 147 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 GATD1Q8NB37 220 aa14□□□□□ -0.17
PDLIM7-207ENST00000486828 CHCHD1Q96BP2 118 aaKnown RBP14□□□□□ -0.17
PDLIM7-207ENST00000486828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 SRSF1Q07955 248 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 C15orf32Q32M92 178 aa13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 SPATA45Q537H7 98 aa13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 EBLN2Q6P2I7 272 aa13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 SMAD5-AS1Q9Y6J3 95 aa13.99□□□□□ -0.17
PDLIM7-207ENST00000486828 CENPVL3A0A0U1RRI6 287 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 A0A1B0GW15 77 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 COX8CQ7Z4L0 72 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 UTP20O75691 2785 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 C2orf70A6NJV1 201 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 GPR183P32249 361 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 RHOGP84095 191 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 PMCHL1Q16048 86 aa13.98□□□□□ -0.17
PDLIM7-207ENST00000486828 TACC2O95359 2948 aa13.97□□□□□ -0.17
PDLIM7-207ENST00000486828 IGKV2-40A0A087WW87 121 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-207ENST00000486828 IGKV2D-40P01614 121 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-207ENST00000486828 NUTF2P61970 127 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-207ENST00000486828 M0QZ24 198 aa13.96□□□□□ -0.17
PDLIM7-207ENST00000486828 M0QZK8 103 aa13.96□□□□□ -0.17
PDLIM7-207ENST00000486828 IGHV4-39P01824 125 aa13.96□□□□□ -0.17
PDLIM7-207ENST00000486828 SAPCD1Q5SSQ6 148 aa13.96□□□□□ -0.17
PDLIM7-207ENST00000486828 LCN12Q6JVE5 192 aa13.96□□□□□ -0.17
PDLIM7-207ENST00000486828 USP9YO00507 2555 aaPredicted RBP13.96□□□□□ -0.18
PDLIM7-207ENST00000486828 LINC00614P0C842 121 aa13.96□□□□□ -0.18
PDLIM7-207ENST00000486828 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.18
PDLIM7-207ENST00000486828 ZFAND3Q9H8U3 227 aa13.96□□□□□ -0.18
PDLIM7-207ENST00000486828 WNK2Q9Y3S1 2297 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 GCN1Q92616 2671 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHV1-24A0A0C4DH33 117 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHV3-35A0A0C4DH35 117 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 SH2D1AO60880 128 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 CLEC3BP05452 202 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 C5orf56Q8N8D9 126 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 PRR25Q96S07 402 aa13.95□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHV3OR16-8A0A075B7F1 116 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 TMEM189A5PLL7 270 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHG4P01861 327 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 RAB9AP51151 201 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 CLEC5AQ9NY25 188 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 LINC01548A6NM66 108 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 G3V318 75 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 CYB5R2Q6BCY4 276 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 CCDC140Q96MF4 163 aa13.94□□□□□ -0.18
PDLIM7-207ENST00000486828 A0A087X0K7 114 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 GOSR1O95249 250 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 IGLC3P0DOY3 106 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 PAX8Q06710 450 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 ATOH7Q8N100 152 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 KLHDC1Q8N7A1 406 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 TMEM70Q9BUB7 260 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 TPPP3Q9BW30 176 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 UQCR10Q9UDW1 63 aa13.93□□□□□ -0.18
PDLIM7-207ENST00000486828 BUB3O43684 328 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 IGFL4Q6B9Z1 124 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 ZNF493Q6ZR52 646 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 EEF1AKMT3Q96AZ1 226 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 VGLL1Q99990 258 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 HLA-DMBP28068 263 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 LYZL1Q6UWQ5 148 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 CLEC19AQ6UXS0 136 aa13.92□□□□□ -0.18
PDLIM7-207ENST00000486828 TMSB15BA0A087X1C1 80 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 TRBV7-1A0A0A6YYK4 115 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 CRXO43186 299 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 OR5AL1P0C617 328 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 SPATA12Q7Z6I5 190 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 Q8TAT8 98 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
PDLIM7-207ENST00000486828 TRAV9-2A0A087WT02 112 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 CLPSL1A2RUU4 121 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 BMI1P35226 326 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 MAJINQ3KP22 176 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHV1-69DA0A0B4J2H0 117 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 C20orf202A1L168 122 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 IGHV1-69P01742 117 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 RPS20P60866 119 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 PIMREGQ9BSJ6 248 aa13.9□□□□□ -0.18
PDLIM7-207ENST00000486828 MED13LQ71F56 2210 aa13.9□□□□□ -0.19
PDLIM7-207ENST00000486828 CENPEQ02224 2701 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 300.4 ms