RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 LEPROTL1O95214 131 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 CRIP1P50238 77 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 NEGR1Q7Z3B1 354 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 PMCHL2Q9BQD1 86 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 TMEM191AQ9H0A3 160 aa13.77□□□□□ -0.21
TNXB-205ENST00000486148 SPTA1P02549 2419 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 FANCD2OSQ96PS1 177 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 HRNRQ86YZ3 2850 aaPredicted RBP13.76□□□□□ -0.21
TNXB-205ENST00000486148 UQCRFS1P47985 274 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 PSG3Q16557 428 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
TNXB-205ENST00000486148 ODF3BA8MYP8 253 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 GNG7O60262 68 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 SAMD13Q5VXD3 122 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 RAB1BQ9H0U4 201 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.75□□□□□ -0.21
TNXB-205ENST00000486148 H0Y8G0 127 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 CEACAM3P40198 252 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 NDPQ00604 133 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 LYPD1Q8N2G4 141 aa13.75□□□□□ -0.21
TNXB-205ENST00000486148 A0A1B0GUT8 65 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 F8W735 103 aaPredicted RBP13.74□□□□□ -0.21
TNXB-205ENST00000486148 DYNAPQ8N1N2 210 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 C8orf49Q96NF6 230 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 IGLV11-55A0A075B6I3 123 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 NDUFS8O00217 210 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 BMI1P35226 326 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 GTF2H5Q6ZYL4 71 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
TNXB-205ENST00000486148 K7EP34 96 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 K7EQM0 130 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 C9orf118A6NHY6 69 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 IGHV3-23P01764 117 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 CSN3P07498 182 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 PRTN3P24158 256 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 ADORA2A-AS1P86434 159 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 NHLH1Q02575 133 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
TNXB-205ENST00000486148 H3BUT2 72 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 M0R1W7 72 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 COX8AP10176 69 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 NPIPB5A8MRT5 1133 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 SEC11AP67812 179 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 Q5PR19 223 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 ARPC1AQ92747 370 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 TPPP3Q9BW30 176 aa13.72□□□□□ -0.21
TNXB-205ENST00000486148 MFAP4P55083 255 aa13.71□□□□□ -0.21
TNXB-205ENST00000486148 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.22
TNXB-205ENST00000486148 RIGQ13278 110 aa13.71□□□□□ -0.22
TNXB-205ENST00000486148 C11orf71Q6IPW1 123 aa13.71□□□□□ -0.22
TNXB-205ENST00000486148 ZNF562Q6V9R5 426 aa13.71□□□□□ -0.22
TNXB-205ENST00000486148 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.22
TNXB-205ENST00000486148 PET117Q6UWS5 81 aa13.7□□□□□ -0.22
TNXB-205ENST00000486148 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
TNXB-205ENST00000486148 MAP1LC3CQ9BXW4 147 aa13.7□□□□□ -0.22
TNXB-205ENST00000486148 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
TNXB-205ENST00000486148 H3BRM9 83 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 NPFFR1Q9GZQ6 430 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 TIMM8BQ9Y5J9 83 aaPredicted RBP13.69□□□□□ -0.22
TNXB-205ENST00000486148 PDE6HQ13956 83 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 GATD1Q8NB37 220 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 NEU4Q8WWR8 484 aaPredicted RBP13.69□□□□□ -0.22
TNXB-205ENST00000486148 ZNF48Q96MX3 618 aaPredicted RBP13.69□□□□□ -0.22
TNXB-205ENST00000486148 AP1S3Q96PC3 154 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 AAMDCQ9H7C9 122 aa13.69□□□□□ -0.22
TNXB-205ENST00000486148 TMSB15BA0A087X1C1 80 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 OR2K2Q8NGT1 345 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 FGF6P10767 208 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 LINC01545Q5VT33 79 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 Q8N6K4 173 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 OR10AG1Q8NH19 301 aa13.68□□□□□ -0.22
TNXB-205ENST00000486148 IGKV2-40A0A087WW87 121 aaPredicted RBP13.67□□□□□ -0.22
TNXB-205ENST00000486148 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 IGKV2D-40P01614 121 aaPredicted RBP13.67□□□□□ -0.22
TNXB-205ENST00000486148 OR5AL1P0C617 328 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 AZU1P20160 251 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 IGF2RP11717 2491 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 CT45A10P0DMU9 189 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 ZFP36P26651 326 aaKnown RBP13.67□□□□□ -0.22
TNXB-205ENST00000486148 GTSF1LQ9H1H1 148 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 SVEP1Q4LDE5 3571 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 EGR2P11161 476 aaPredicted RBP13.67□□□□□ -0.22
TNXB-205ENST00000486148 KIR3DS1Q14943 382 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 RABAC1Q9UI14 185 aa13.67□□□□□ -0.22
TNXB-205ENST00000486148 ATRXP46100 2492 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 NCR2O95944 276 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 LYZL1Q6UWQ5 148 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 TMEM213A2RRL7 107 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 SH2D1AO60880 128 aa13.66□□□□□ -0.22
TNXB-205ENST00000486148 CSN1S1P47710 185 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms