RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ZNF562Q6V9R5 426 aa11.52□□□□□ -0.56
COL20A1-206ENST00000479501 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 FXYD7P58549 80 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 TMEM190Q8WZ59 177 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 SLC25A2Q9BXI2 301 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 CEP192Q8TEP8 1941 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 CKS1BP61024 79 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 GAGE2EQ4V326 116 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 C18orf32Q8TCD1 76 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.57
COL20A1-206ENST00000479501 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
COL20A1-206ENST00000479501 NPFFO15130 113 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 TPSG1Q9NRR2 321 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 TNCP24821 2201 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 TLN1Q9Y490 2541 aaKnown RBP11.51□□□□□ -0.57
COL20A1-206ENST00000479501 H7C1H1 209 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 ORMDL2Q53FV1 153 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
COL20A1-206ENST00000479501 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
COL20A1-206ENST00000479501 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
COL20A1-206ENST00000479501 SAA4P35542 130 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
COL20A1-206ENST00000479501 GAGE1Q13065 139 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 CD300EQ496F6 205 aaPredicted RBP11.5□□□□□ -0.57
COL20A1-206ENST00000479501 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
COL20A1-206ENST00000479501 F2Z2F3 143 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 TOMM40O96008 361 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 LYPD1Q8N2G4 141 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 IGHV4-39P01824 125 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 PAX2Q02962 417 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
COL20A1-206ENST00000479501 SHISA9B4DS77 424 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PRR20EP86478 221 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PRR20CP86479 221 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PRR20DP86480 221 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PRR20BP86481 221 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PRR20AP86496 221 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 PSG3Q16557 428 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 IGF2RP11717 2491 aa11.49□□□□□ -0.57
COL20A1-206ENST00000479501 ZNF114Q8NC26 417 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 TRAV2A0A0B4J234 112 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 H3BUX3 64 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 Q6ZPA2 131 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 HAX1O00165 279 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 STPG4Q8N801 248 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 NOTCH2Q04721 2471 aa11.48□□□□□ -0.57
COL20A1-206ENST00000479501 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
COL20A1-206ENST00000479501 MSMPQ1L6U9 139 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 PRSS22Q9GZN4 317 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 B4DSR2 109 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 SMAD7O15105 426 aaKnown RBP11.47□□□□□ -0.57
COL20A1-206ENST00000479501 IGLL1P15814 213 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
COL20A1-206ENST00000479501 UBE2E1P51965 193 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 TMEM249Q2WGJ8 235 aa11.47□□□□□ -0.57
COL20A1-206ENST00000479501 LAGE3Q14657 143 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 TRAV12-3A0A0B4J271 114 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 PLNP26678 52 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 Q8TAT8 98 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 C11orf52Q96A22 123 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
COL20A1-206ENST00000479501 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.58
COL20A1-206ENST00000479501 PAX1P15863 534 aa11.46□□□□□ -0.58
COL20A1-206ENST00000479501 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.58
COL20A1-206ENST00000479501 DSCR9P59020 149 aa11.46□□□□□ -0.58
COL20A1-206ENST00000479501 TRBV7-1A0A0A6YYK4 115 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 H3BRM9 83 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 Q86TA4 180 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
COL20A1-206ENST00000479501 LRP4O75096 1905 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 NDUFB8O95169 186 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 PDE6HQ13956 83 aa11.45□□□□□ -0.58
COL20A1-206ENST00000479501 C22orf46C9J442 243 aa11.44□□□□□ -0.58
COL20A1-206ENST00000479501 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms