RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
HLA-DMB-260ENST00000477537 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
HLA-DMB-260ENST00000477537 MEGF9Q9H1U4 602 aa8.55□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGKV2-40A0A087WW87 121 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 TRAV41A0A0B4J266 112 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF705FA8MVS1 300 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGKV2D-40P01614 121 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 GPX1P07203 203 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF705DP0CH99 300 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF705BP0CI00 300 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 COX6B1P14854 86 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 PMCHP20382 165 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 DDTP30046 118 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 NRGNQ92686 78 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 TRBV7-1A0A0A6YYK4 115 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 MSMBP08118 114 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 AMTP48728 403 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 CRIP1P50238 77 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 DEFA6Q01524 100 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 KLF5Q13887 457 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 LY6EQ16553 131 aa8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMB-260ENST00000477537 IGHV3-66A0A0C4DH42 116 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 A8MWP6 167 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 CHEK1O14757 476 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 ZNF324O75467 553 aaPredicted RBP8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 CT45A10P0DMU9 189 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 HLA-DMBP28068 263 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 FAM209BQ5JX69 171 aa8.53□□□□□ -1.04
HLA-DMB-260ENST00000477537 CLPSL1A2RUU4 121 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 BUB3O43684 328 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 PAX1P15863 534 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 CRIP2P52943 208 aaPredicted RBP8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 RELQ04864 619 aaPredicted RBP8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 NRN1Q9NPD7 142 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 RNF114Q9Y508 228 aa8.52□□□□□ -1.04
HLA-DMB-260ENST00000477537 BAHCC1Q9P281 2608 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 A0A087X0K7 114 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 FAM223BA6NKX1 122 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 H3BUX3 64 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 ZNF207O43670 478 aaKnown RBP8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 IGHG4P01861 327 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 TRGV3P03979 118 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 RAB9AP51151 201 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 FOXA3P55318 350 aaPredicted RBP8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 KRTDAPP60985 99 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 FAM223AQ8IWN6 122 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 C14orf144Q96I85 54 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 VGLL1Q99990 258 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 NAV2Q8IVL1 2488 aa8.52□□□□□ -1.05
HLA-DMB-260ENST00000477537 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 A6NDX4 124 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 SH2D1AO60880 128 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 NTF3P20783 257 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 DSCR9P59020 149 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 SAPCD1Q5SSQ6 148 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 REC114Q7Z4M0 266 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 METTL26Q96S19 204 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 HIF1ANQ9NWT6 349 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 CCDC168Q8NDH2 2452 aa8.51□□□□□ -1.05
HLA-DMB-260ENST00000477537 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 B4DSR2 109 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 RIGQ13278 110 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 FAM162BQ5T6X4 162 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 RNASEKQ6P5S7 137 aaKnown RBP8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 NIT1Q86X76 327 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 Q8TAT8 98 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 PRR25Q96S07 402 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 NOTCH2Q04721 2471 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 TMEM189A5PLL7 270 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 AVPP01185 164 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 ARMS2P0C7Q2 107 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 C1orf194Q5T5A4 169 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 RNF182Q8N6D2 247 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 TPPP3Q9BW30 176 aa8.5□□□□□ -1.05
HLA-DMB-260ENST00000477537 LOC102724200A0A096LPH7 203 aaPredicted RBP8.49□□□□□ -1.05
HLA-DMB-260ENST00000477537 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
HLA-DMB-260ENST00000477537 HSBP1O75506 76 aa8.49□□□□□ -1.05
HLA-DMB-260ENST00000477537 IGF1P05019 195 aa8.49□□□□□ -1.05
HLA-DMB-260ENST00000477537 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
HLA-DMB-260ENST00000477537 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms