RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 HIST1H4GQ99525 98 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF442Q9H7R0 627 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 MAP6D1Q9H9H5 199 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 NXT2Q9NPJ8 142 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 STARD5Q9NSY2 213 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 LHFPL6Q9Y693 200 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 ZDBF2Q9HCK1 2354 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 IGKV6D-21A0A0A0MT36 114 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 A0A0U1RQV1 116 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 MYBPHLA2RUH7 354 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 PGPA6NDG6 321 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 H3BT86 120 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 H3BVH4 76 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 TCL1BO95988 128 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 P01737 135 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 BGLAPP02818 100 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 HMGN2P05204 90 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 IFI6P09912 130 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 LIFP15018 202 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 GATA1P15976 413 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF56Q15929 161 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 CENPWQ5EE01 88 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 DEFB121Q5J5C9 76 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 Q6ZRU5 148 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC01561Q8N1V8 128 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 IFI27L1Q96BM0 104 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 DPH3P1Q9H4G8 78 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 FGF22Q9HCT0 170 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 TRANK1O15050 2925 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 CHD9Q3L8U1 2897 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF318Q5VUA4 2279 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 TMEM150CB9EJG8 249 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC00271P0C7V0 271 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 EFNA4P52798 201 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 GFERP55789 205 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 HIST1H4AP62805 103 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 RPL18Q07020 188 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 TMEM155Q4W5P6 130 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 PCSK4Q6UW60 755 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF793Q6ZN11 406 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 GTSCR1Q86UQ5 136 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 SERP2Q8N6R1 65 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 NEXN-AS1Q8NBZ9 246 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 NPCDR1Q9BY65 106 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 PLEKHA3Q9HB20 300 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 PDFQ9HBH1 243 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 TECTAO75443 2155 aa4.66□□□□□ -1.66
ECHDC1-215ENST00000475319 LAMA2P24043 3122 aaKnown RBP4.65□□□□□ -1.66
ECHDC1-215ENST00000475319 PRUNE2Q8WUY3 3088 aa4.65□□□□□ -1.66
ECHDC1-215ENST00000475319 OBSL1O75147 1896 aa4.65□□□□□ -1.66
ECHDC1-215ENST00000475319 TRGV5A0A0B4J1U4 118 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 C19orf71A6NCJ1 209 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 IGHG2P01859 326 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 MAGEA5P43359 124 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 EMDP50402 254 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 UBE2D1P51668 147 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 NCBP2P52298 156 aaKnown RBP eCLIP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 FXYD4P59646 89 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 ERVK-16P61578 105 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 CACNG7P62955 275 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 ZNF816Q0VGE8 651 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 C5orf38Q86SI9 138 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 PRR15Q8IV56 129 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 VKORC1L1Q8N0U8 176 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 OR52N5Q8NH56 324 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 MRPL53Q96EL3 112 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 C1orf147Q96MC9 270 aaPredicted RBP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 RTL8AQ9BWD3 113 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 RPUSD1Q9UJJ7 312 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 LSM7Q9UK45 103 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 CACNA1HO95180 2353 aa4.65□□□□□ -1.67
ECHDC1-215ENST00000475319 NUP214P35658 2090 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 FAM186AA6NE01 2351 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 WNT9BO14905 357 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 LTAP01374 205 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 HERVK_113P61574 105 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 TWIST1Q15672 202 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 IGFL2Q6UWQ7 119 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 CNRIP1Q96F85 164 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 C16orf95Q9H693 158 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 TMEM167BQ9NRX6 74 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 RNF7Q9UBF6 113 aa4.64□□□□□ -1.67
ECHDC1-215ENST00000475319 RIF1Q5UIP0 2472 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-215ENST00000475319 ZFHX2Q9C0A1 2572 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-215ENST00000475319 IGLV3-10A0A075B6K4 115 aa4.63□□□□□ -1.67
ECHDC1-215ENST00000475319 TMSB15BA0A087X1C1 80 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms