RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CCL8P80075 99 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 ZFP2Q6ZN57 461 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 MORN4Q8NDC4 146 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 ZNF563Q8TA94 476 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 CCL13Q99616 98 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 ZNF747Q9BV97 191 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 SLC25A15Q9Y619 301 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 SIP14410 1827 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 C19orf71A6NCJ1 209 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 RNF223E7ERA6 249 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 TRBV12-3P01733 135 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 SNRPGP62308 76 aaKnown RBP2.63□□□□□ -1.99
UBR3-208ENST00000474426 GFRALQ6UXV0 394 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 Q8N8P6 123 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 LINC01555Q8NAE3 123 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 ZNRF1Q8ND25 227 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 DOCK11Q5JSL3 2073 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 UBE2L5PA0A1B0GUS4 154 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 PRH1P02810 166 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 MP68P56378 58 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
UBR3-208ENST00000474426 C6orf99Q4VX62 202 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 C16orf47Q6ZP98 133 aaPredicted RBP2.63□□□□□ -1.99
UBR3-208ENST00000474426 FAM57BQ71RH2 274 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 SERP2Q8N6R1 65 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 TAF15Q92804 592 aaKnown RBP eCLIP2.63□□□□□ -1.99
UBR3-208ENST00000474426 ZNF286AQ9HBT8 521 aa2.63□□□□□ -1.99
UBR3-208ENST00000474426 REV3LO60673 3130 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 PAPPAQ13219 1627 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 UBR3Q6ZT12 1888 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 TRAV9-1A0A075B6T8 112 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 A0A0J9YXV3 536 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 BMPR1BO00238 502 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 COX7A2LO14548 114 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 NDUFB3O43676 98 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 IGKV1-5P01602 117 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 CCKP06307 115 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 HERVK_113P61574 105 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 MRPS36P82909 103 aaKnown RBP2.62□□□□□ -1.99
UBR3-208ENST00000474426 CHCHD10Q8WYQ3 142 aaPredicted RBP2.62□□□□□ -1.99
UBR3-208ENST00000474426 EPDR1Q9UM22 224 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 IGKV1-8A0A0C4DH67 115 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 IRGMA1A4Y4 181 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 SCGB1C2P0DMR2 95 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 MORN5Q5VZ52 161 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 GPHB5Q86YW7 130 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 ZNF492Q9P255 531 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 COL3A1P02461 1466 aaPredicted RBP2.62□□□□□ -1.99
UBR3-208ENST00000474426 PCNTO95613 3336 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 GON4LQ3T8J9 2241 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 IGKV1-27A0A075B6S5 117 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 A0A1B0GTL3 188 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 BUB1B-PAK6H3BSN5 160 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
UBR3-208ENST00000474426 TMEM155Q4W5P6 130 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 TMEM252Q8N6L7 170 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 PROK2Q9HC23 129 aa2.62□□□□□ -1.99
UBR3-208ENST00000474426 NOTCH4Q99466 2003 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 KCPQ6ZWJ8 1503 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 TOGARAM1Q9Y4F4 1720 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 LOC389332A0A1B0GUA5 103 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 UBE2L6O14933 153 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 ZNF56Q15929 161 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 TOMM6Q96B49 74 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 NHP2Q9NX24 153 aaKnown RBP2.61□□□□□ -1.99
UBR3-208ENST00000474426 SHROOM3Q8TF72 1996 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 PAPPA2Q9BXP8 1791 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.61□□□□□ -1.99
UBR3-208ENST00000474426 IGLV3-10A0A075B6K4 115 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 IGHV3OR16-9A0A0B4J2B5 98 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 K7EQD1 137 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 LTAP01374 205 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 FCGR2CP31995 323 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 UBE2D3P61077 147 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 UBE2D2P62837 147 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 SDIM1Q6ZPB5 146 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 SPACA3Q8IXA5 215 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 NTN5Q8WTR8 489 aaPredicted RBP2.61□□□□□ -1.99
UBR3-208ENST00000474426 TNFRSF12AQ9NP84 129 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 LRP4O75096 1905 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 NACAE9PAV3 2078 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 WNT9BO14905 357 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 IGHV3-9P01782 118 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 REG3AQ06141 175 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 USP34Q70CQ2 3546 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 OPRPNQ99935 248 aaPredicted RBP2.61□□□□□ -1.99
UBR3-208ENST00000474426 KLK13Q9UKR3 277 aa2.61□□□□□ -1.99
UBR3-208ENST00000474426 ZNF706Q9Y5V0 76 aaPredicted RBP2.61□□□□□ -1.99
UBR3-208ENST00000474426 MYO7AQ13402 2215 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 NXPH4O95158 308 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 IGKV1-16P04430 117 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 RBM3P98179 157 aaKnown RBP2.6□□□□□ -1.99
UBR3-208ENST00000474426 ZNF645Q8N7E2 425 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 ZNF524Q96C55 264 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 SMIM7Q9BQ49 75 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 LCTP09848 1927 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 LTBP2Q14767 1821 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 COL4A6Q14031 1691 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 IGHV1OR21-1A0A087WYE8 117 aa2.6□□□□□ -1.99
UBR3-208ENST00000474426 IGHV6-1A0A0B4J1U7 121 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms