RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-208	ENST00000472230	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	IGKV2D-40	P01614	121 aa	Predicted RBP	14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	ELANE	P08246	267 aa		14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	HLA-DMB	P28068	263 aa		14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	FAM106A	Q4KMX7	169 aa		14.04	□□□□□ -0.16
GCFC2-208	ENST00000472230	IZUMO1R	A6ND01	250 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	SPINK4	O60575	86 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	RPLP1	P05386	114 aa	Known RBP	14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	LCN12	Q6JVE5	192 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	GLMP	Q8WWB7	406 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	C19orf71	A6NCJ1	209 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	LINC00322	Q6ZN03	302 aa	Predicted RBP	14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	TSKU	Q8WUA8	353 aa		14.03	□□□□□ -0.16
GCFC2-208	ENST00000472230	CT45A10	P0DMU9	189 aa		14.02	□□□□□ -0.16
GCFC2-208	ENST00000472230	NAT8B	Q9UHF3	227 aa		14.02	□□□□□ -0.16
GCFC2-208	ENST00000472230	ZFHX3	Q15911	3703 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	ZNF705F	A8MVS1	300 aa	Predicted RBP	14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230		A8MWL6	223 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	COX19	Q49B96	90 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	C8orf86	Q6ZUL3	223 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	OR4B1	Q8NGF8	309 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	ZC2HC1A	Q96GY0	325 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	ASCL2	Q99929	193 aa		14.02	□□□□□ -0.17
GCFC2-208	ENST00000472230	CT83	Q5H943	113 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	SAPCD1	Q5SSQ6	148 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	WDR73	Q6P4I2	378 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230		Q8N2B8	174 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	RNF182	Q8N6D2	247 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	DAZ1	Q9NQZ3	744 aa	Known RBP	14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	HOXA5	P20719	270 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	CBLN1	P23435	193 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	KRTAP1-1	Q07627	177 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	C16orf92	Q96LL3	132 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	CLEC5A	Q9NY25	188 aa		14.01	□□□□□ -0.17
GCFC2-208	ENST00000472230	ZAN	Q9Y493	2812 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	IGHV7-4-1	A0A0J9YVY3	117 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	SNURFL	B1AK76	121 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	MRPL54	Q6P161	138 aa	Known RBP	14	□□□□□ -0.17
GCFC2-208	ENST00000472230	GPHB5	Q86YW7	130 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	NEU1	Q99519	415 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	NDFIP1	Q9BT67	221 aa		14	□□□□□ -0.17
GCFC2-208	ENST00000472230	LGALS1	P09382	135 aa	Known RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	TM4SF20	Q53R12	229 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	C8orf49	Q96NF6	230 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	GNB1L	Q9BYB4	327 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	MRPL18	Q9H0U6	180 aa	Known RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	UFC1	Q9Y3C8	167 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	HELZ2	Q9BYK8	2649 aa	Known RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	ITPR3	Q14573	2671 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230		K7EMT4	169 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	RAB4B	P61018	213 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	RPL11	P62913	178 aa	Known RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230		Q71RC1	249 aa	Predicted RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	NUP35	Q8NFH5	326 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	OR2D3	Q8NGH3	330 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	MRPL53	Q96EL3	112 aa	Known RBP	13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	VGLL1	Q99990	258 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	RHPN1-AS1	Q9BWJ2	59 aa		13.99	□□□□□ -0.17
GCFC2-208	ENST00000472230	DNAJC9-AS1	A6NH13	148 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	HIGD1C	A8MV81	97 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	MT-ND6	P03923	174 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	UBE2E2	Q96LR5	201 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	TRAV8-2	A0A0B4J237	113 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	XKRY2	A2RUG3	117 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	RBAKDN	A6NC62	111 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	NPIPB6	E9PJ23	425 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	SMUG1	Q53HV7	270 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	PRR25	Q96S07	402 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	TEX15	Q9BXT5	2789 aa		13.98	□□□□□ -0.17
GCFC2-208	ENST00000472230	BMI1	P35226	326 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	CDX1	P47902	265 aa	Predicted RBP	13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	SCGB2A2	Q13296	93 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	TCF24	Q7RTU0	167 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	MYOZ3	Q8TDC0	251 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	GFRA4	Q9GZZ7	299 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	SMPX	Q9UHP9	88 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	RNF152	Q8N8N0	203 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230		Q8TAT8	98 aa		13.97	□□□□□ -0.17
GCFC2-208	ENST00000472230	PDZD2	O15018	2839 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	FAM181B	A6NEQ2	426 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	PRAC2	D3DTV9	90 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	FRMD6-AS1	P0C7T7	363 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	ERCC8	Q13216	396 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	RASL11A	Q6T310	242 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	KLHDC1	Q8N7A1	406 aa		13.96	□□□□□ -0.17
GCFC2-208	ENST00000472230	HLA-DQA1	P01909	254 aa		13.95	□□□□□ -0.18
GCFC2-208	ENST00000472230	FAM231B	A6NCW3	169 aa		13.95	□□□□□ -0.18
GCFC2-208	ENST00000472230	FAM162B	Q5T6X4	162 aa		13.95	□□□□□ -0.18
GCFC2-208	ENST00000472230	TMEM136	Q6ZRR5	245 aa		13.95	□□□□□ -0.18
GCFC2-208	ENST00000472230	NRN1	Q9NPD7	142 aa		13.95	□□□□□ -0.18
GCFC2-208	ENST00000472230	S100A8	P05109	93 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	S100A2	P29034	98 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	CRIP1	P50238	77 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	TMEM78	Q5T7P6	136 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	ATP5L2	Q7Z4Y8	100 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	ZNF738	Q8NE65	137 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	PGLYRP4	Q96LB8	373 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	PDZD11	Q5EBL8	140 aa		13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.94	□□□□□ -0.18
GCFC2-208	ENST00000472230	COX8C	Q7Z4L0	72 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms