RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 KIR2DL5AQ8N109 375 aa14.43□□□□□ -0.1
COL20A1-205ENST00000471582 NRN1Q9NPD7 142 aa14.43□□□□□ -0.1
COL20A1-205ENST00000471582 GCN1Q92616 2671 aaKnown RBP14.42□□□□□ -0.1
COL20A1-205ENST00000471582 A0A1B0GW15 77 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 ZNF705FA8MVS1 300 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-205ENST00000471582 MSMBP08118 114 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 ZNF705DP0CH99 300 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-205ENST00000471582 ZNF705BP0CI00 300 aaPredicted RBP14.42□□□□□ -0.1
COL20A1-205ENST00000471582 FAM162BQ5T6X4 162 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 CELSR2Q9HCU4 2923 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 DOPEY2Q9Y3R5 2298 aa14.42□□□□□ -0.1
COL20A1-205ENST00000471582 TRAV41A0A0B4J266 112 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 FAM223BA6NKX1 122 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 CHEK1O14757 476 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 BUB3O43684 328 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 PMCHP20382 165 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 CRIP1P50238 77 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 BRD3OSQ6XYD6 125 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 FAM223AQ8IWN6 122 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 NDUFAF3Q9BU61 184 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 CENPEQ02224 2701 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 IGHV3OR16-10A0A075B7F0 116 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 A0A1B0GUT8 65 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 CD33P20138 364 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 RELQ04864 619 aaPredicted RBP14.41□□□□□ -0.1
COL20A1-205ENST00000471582 CLEC19AQ6UXS0 136 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 GATD1Q8NB37 220 aa14.41□□□□□ -0.1
COL20A1-205ENST00000471582 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
COL20A1-205ENST00000471582 B4DSR2 109 aa14.4□□□□□ -0.1
COL20A1-205ENST00000471582 ATP5G2Q06055 141 aa14.4□□□□□ -0.1
COL20A1-205ENST00000471582 CSMD2Q7Z408 3487 aa14.4□□□□□ -0.1
COL20A1-205ENST00000471582 IGHV3-35A0A0C4DH35 117 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 CLPSL1A2RUU4 121 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 IGHG4P01861 327 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 RIGQ13278 110 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 NIT1Q86X76 327 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 C8orf49Q96NF6 230 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 FBN2P35556 2912 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 IGKV2-40A0A087WW87 121 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-205ENST00000471582 LOC102724200A0A096LPH7 203 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-205ENST00000471582 BRI3O95415 125 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 IGKV2D-40P01614 121 aaPredicted RBP14.39□□□□□ -0.11
COL20A1-205ENST00000471582 IGF1P05019 195 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 IGHV4-38-2P0DP08 117 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 PRR25Q96S07 402 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 NDFIP1Q9BT67 221 aa14.39□□□□□ -0.11
COL20A1-205ENST00000471582 HSBP1O75506 76 aa14.38□□□□□ -0.11
COL20A1-205ENST00000471582 KRTDAPP60985 99 aa14.38□□□□□ -0.11
COL20A1-205ENST00000471582 DMRTA1Q5VZB9 504 aa14.38□□□□□ -0.11
COL20A1-205ENST00000471582 SLC50A1Q9BRV3 221 aa14.38□□□□□ -0.11
COL20A1-205ENST00000471582 IGHV3OR16-8A0A075B7F1 116 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 GATA3P23771 443 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 RNF114Q9Y508 228 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 M0QZK8 103 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 Q8N976 141 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 METTL26Q96S19 204 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 ASCL2Q99929 193 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 C20orf144Q9BQM9 153 aa14.37□□□□□ -0.11
COL20A1-205ENST00000471582 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.36□□□□□ -0.11
COL20A1-205ENST00000471582 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 A6NDX4 124 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 H3BUA1 57 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 SH2D1AO60880 128 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 ARMS2P0C7Q2 107 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 LCN12Q6JVE5 192 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 BORCS7Q96B45 105 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 ZMAT5Q9UDW3 170 aaKnown RBP14.36□□□□□ -0.11
COL20A1-205ENST00000471582 U3KQE9 123 aa14.36□□□□□ -0.11
COL20A1-205ENST00000471582 TMEM189A5PLL7 270 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 KRTAP10-9P60411 292 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 CYB5R2Q6BCY4 276 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 RNASEKQ6P5S7 137 aaKnown RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 LURAP1LQ8IV03 231 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 HIF1ANQ9NWT6 349 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 SVEP1Q4LDE5 3571 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 CSMD1Q96PZ7 3565 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 PTPN13Q12923 2485 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 FASNP49327 2511 aaKnown RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 IGHG2P01859 326 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 NTF3P20783 257 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 BMI1P35226 326 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 RPS20P60866 119 aaKnown RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 SRSF2Q01130 221 aaKnown RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 LBHQ53QV2 105 aaPredicted RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 PSMG3-AS1Q96PY0 264 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 VGLL1Q99990 258 aa14.35□□□□□ -0.11
COL20A1-205ENST00000471582 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
COL20A1-205ENST00000471582 VPS13CQ709C8 3753 aa14.34□□□□□ -0.11
COL20A1-205ENST00000471582 TRGV3P03979 118 aa14.34□□□□□ -0.11
COL20A1-205ENST00000471582 C3orf79P0CE67 100 aa14.34□□□□□ -0.11
COL20A1-205ENST00000471582 MRPL53Q96EL3 112 aaKnown RBP14.34□□□□□ -0.11
COL20A1-205ENST00000471582 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
COL20A1-205ENST00000471582 ANKRD17O75179 2603 aaKnown RBP14.34□□□□□ -0.11
COL20A1-205ENST00000471582 H3BUX3 64 aa14.33□□□□□ -0.11
COL20A1-205ENST00000471582 M0R2Z0 102 aa14.33□□□□□ -0.11
COL20A1-205ENST00000471582 PRB4P10163 310 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms