RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 BUB1B-PAK6H3BSN5 160 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 IGKV1D-12P01611 117 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 RPP25LQ8N5L8 163 aaKnown RBP5.57□□□□□ -1.52
BRCA1-210ENST00000471181 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 IGLL5B9A064 214 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 H0YJW9 148 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 FGFBP3Q8TAT2 258 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 ETV2O00321 342 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV4-59P01825 116 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 C20orf204Q6ZNR8 217 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 GPHB5Q86YW7 130 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 DYNAPQ8N1N2 210 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 SPRR3Q9UBC9 169 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 J3KT08 172 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 K7EP13 123 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 IGLC2P0DOY2 106 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 IGLC3P0DOY3 106 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 ZNF664Q8N3J9 261 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 TRBV24-1A0A075B6N3 115 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 A0A1W2PPM0 123 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 E9PLN8 166 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 C5orf67F2Z3F1 127 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 HLA-DMBP28068 263 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 CDKN1BP46527 198 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 ZNF362Q5T0B9 420 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-210ENST00000471181 NOP10Q9NPE3 64 aaKnown RBP5.56□□□□□ -1.52
BRCA1-210ENST00000471181 IGLV10-54A0A075B6I4 117 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-210ENST00000471181 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 IGKV2-29A2NJV5 120 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-210ENST00000471181 WIPF3A6NGB9 483 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 PFN1P07737 140 aaKnown RBP5.56□□□□□ -1.52
BRCA1-210ENST00000471181 TM2D2Q9BX73 214 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 OTOFQ9HC10 1997 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 TTC3P53804 2025 aa5.56□□□□□ -1.52
BRCA1-210ENST00000471181 TMEM178BH3BS89 294 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 SAA4P35542 130 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 AMTNQ6UX39 209 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 SEM1Q6ZVN7 128 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 LYPD1Q8N2G4 141 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 LINC00479Q96M42 142 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 Q96MF0 132 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 POLR3KQ9Y2Y1 108 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-210ENST00000471181 PRSS46E5RG02 174 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 TMEM75Q8N9X5 138 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 TMEM190Q8WZ59 177 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 MRPL36Q9P0J6 103 aaKnown RBP5.55□□□□□ -1.52
BRCA1-210ENST00000471181 THSD7BQ9C0I4 1608 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 J3QQQ9 107 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 ZFP36L1Q07352 338 aaKnown RBP5.55□□□□□ -1.52
BRCA1-210ENST00000471181 SPACA3Q8IXA5 215 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 C17orf77Q96MU5 243 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 Q9H8V8 135 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 LRCOL1A6NCL2 159 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 F8W735 103 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-210ENST00000471181 FOXF2Q12947 444 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 CD177Q8N6Q3 437 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 NTF4P34130 210 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 FBLIM1Q8WUP2 373 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 SHANK2-AS3Q9BTD1 123 aa5.55□□□□□ -1.52
BRCA1-210ENST00000471181 COLCA2A8K830 154 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 OOSP1A8MZH6 123 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 H0YIZ8 118 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 ATP6V0E1O15342 81 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 ZFP2Q6ZN57 461 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 NPBQ8NG41 125 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 NTN3O00634 580 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-210ENST00000471181 LY6HO94772 140 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 MRPL51Q4U2R6 128 aaKnown RBP5.54□□□□□ -1.52
BRCA1-210ENST00000471181 NMSQ5H8A3 153 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 A0A0B4J2C4 111 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 MLANAQ16655 118 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 RNF5Q99942 180 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 BPESC1Q9GZL8 116 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 A0A0G2JMZ2 1700 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 IGKV1D-8A0A087WSZ0 117 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 A0A1B0GTI1 187 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 LTAP01374 205 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 C3orf22Q8N5N4 141 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 SLC25A29Q8N8R3 303 aa5.54□□□□□ -1.52
BRCA1-210ENST00000471181 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 A0A1B0GUS0 222 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 SHISA3A0PJX4 238 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 CTSGP08311 255 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 COL8A2P25067 703 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 GAFA1Q96PS6 74 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 MRPL35Q9NZE8 188 aaKnown RBP5.53□□□□□ -1.52
BRCA1-210ENST00000471181 WDR86Q86TI4 376 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 ATAD5Q96QE3 1844 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 CFPP27918 469 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 RHOHQ15669 191 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 SP5Q6BEB4 398 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-210ENST00000471181 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms