RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 HS3ST6Q96QI5 342 aa5.65□□□□□ -1.5
CD46-212ENST00000469535 SHANK2-AS3Q9BTD1 123 aa5.65□□□□□ -1.5
CD46-212ENST00000469535 NDUFA4O00483 81 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 IGHV2-5P01817 119 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 ELANEP08246 267 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 ZFP36P26651 326 aaKnown RBP5.65□□□□□ -1.51
CD46-212ENST00000469535 LOXP28300 417 aaPredicted RBP5.65□□□□□ -1.51
CD46-212ENST00000469535 CDKN1BP46527 198 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 IGHV4-61A0A0C4DH41 118 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 TAL2Q16559 108 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 APRG1Q8IVJ8 170 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 LY6G5BQ8NDX9 201 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 DIDO1Q9BTC0 2240 aaKnown RBP5.65□□□□□ -1.51
CD46-212ENST00000469535 RHODO00212 210 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 LGALS1P09382 135 aaKnown RBP5.65□□□□□ -1.51
CD46-212ENST00000469535 IGHV4-38-2P0DP08 117 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 CCL18P55774 89 aa5.65□□□□□ -1.51
CD46-212ENST00000469535 SRSF8Q9BRL6 282 aaKnown RBP5.65□□□□□ -1.51
CD46-212ENST00000469535 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 WT1P19544 449 aaPredicted RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 TEX36Q5VZQ5 186 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 Q8TCH9 128 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 GFI1Q99684 422 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 MRPL27Q9P0M9 148 aaKnown RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 FBLN5Q9UBX5 448 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 DOCK7Q96N67 2140 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 GREB1LQ9C091 1923 aaPredicted RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 NDUFS5O43920 106 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 AGMATQ9BSE5 352 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 RSPO3Q9BXY4 272 aaPredicted RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 ESM1Q9NQ30 184 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 IGLV3-9A0A075B6K5 115 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 Q6ZR03 302 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 AMN1Q8IY45 258 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 TRAV8-3A0A0A6YYJ7 113 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 KLK5Q9Y337 293 aaPredicted RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 KIAA1671Q9BY89 1806 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 MGAMO43451 1857 aa5.64□□□□□ -1.51
CD46-212ENST00000469535 FNDC1Q4ZHG4 1894 aaPredicted RBP5.64□□□□□ -1.51
CD46-212ENST00000469535 C5orf30Q96GV9 206 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 KLF2Q9Y5W3 355 aaPredicted RBP5.63□□□□□ -1.51
CD46-212ENST00000469535 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.63□□□□□ -1.51
CD46-212ENST00000469535 A8MWV9 139 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 IGHV3-30P01768 117 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 IGHV3-33P01772 117 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 IGHV3-30-3P0DP02 117 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 IGHV3-30-5P0DP03 117 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 NMSQ5H8A3 153 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 LYPD1Q8N2G4 141 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 GNB1LQ9BYB4 327 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 TPSG1Q9NRR2 321 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 ANK1P16157 1881 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 RBMY1FQ15415 496 aaKnown RBP5.63□□□□□ -1.51
CD46-212ENST00000469535 DOCK8Q8NF50 2099 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 SHISA9B4DS77 424 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 H3BMM0 161 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 DIAPH2-AS1Q14236 149 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 UBE2WQ96B02 151 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 ATP6V0BQ99437 205 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 TP53TG1Q9Y2A0 90 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 IGHV7-4-1A0A0J9YVY3 117 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 TEX48A0A1B0GUV7 120 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 I3L3M4 83 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
CD46-212ENST00000469535 NUP35Q8NFH5 326 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 DEFB105AQ8NG35 78 aa5.63□□□□□ -1.51
CD46-212ENST00000469535 ACACAQ13085 2346 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 A0A1B0GV90 55 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 H0YIZ8 118 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 ESDP10768 282 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 Q86TA4 180 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 KIF26BQ2KJY2 2108 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 ZNF833PQ6ZTB9 187 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 C15orf62A8K5M9 175 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 XCL1P47992 114 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 MBD3L1Q8WWY6 194 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 GVINP1Q7Z2Y8 2422 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 TRAV26-2A0A0B4J265 109 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 C17orf58Q2M2W7 97 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 NEGR1Q7Z3B1 354 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 A0A087WWC5 75 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 J3QRE1 110 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
CD46-212ENST00000469535 TMEM170AQ8WVE7 144 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 TMEM14BQ9NUH8 114 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 LINC00479Q96M42 142 aa5.62□□□□□ -1.51
CD46-212ENST00000469535 ZNF503-AS2A6NEH8 195 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 HLA-DRB4P13762 266 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 SLX1AQ9BQ83 275 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 HLA-DRB4X5D2U9 266 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 ARFGEF3Q5TH69 2177 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 DOPEY2Q9Y3R5 2298 aa5.61□□□□□ -1.51
CD46-212ENST00000469535 DEFB4AO15263 64 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms