RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CBY3A6NI87 242 aa12.79□□□□□ -0.36
SLX4-202ENST00000466154 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
SLX4-202ENST00000466154 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
SLX4-202ENST00000466154 RABAC1Q9UI14 185 aa12.79□□□□□ -0.36
SLX4-202ENST00000466154 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
SLX4-202ENST00000466154 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
SLX4-202ENST00000466154 UQCR10Q9UDW1 63 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 RNF24Q9Y225 148 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 IGLC3P0DOY3 106 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 PRSS3P2Q8NHM4 247 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 VGLL1Q99990 258 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 ZFP30Q9Y2G7 519 aa12.78□□□□□ -0.36
SLX4-202ENST00000466154 hDV102S1A0JD36 115 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 TMEM189A5PLL7 270 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 CTSGP08311 255 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 RHOGP84095 191 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 RIGQ13278 110 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 CT83Q5H943 113 aa12.77□□□□□ -0.36
SLX4-202ENST00000466154 OR4C46A6NHA9 309 aa12.77□□□□□ -0.37
SLX4-202ENST00000466154 C19orf84I3L1E1 186 aa12.77□□□□□ -0.37
SLX4-202ENST00000466154 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.37
SLX4-202ENST00000466154 ERCC8Q13216 396 aa12.77□□□□□ -0.37
SLX4-202ENST00000466154 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
SLX4-202ENST00000466154 GNLYP22749 145 aa12.77□□□□□ -0.37
SLX4-202ENST00000466154 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.37
SLX4-202ENST00000466154 ORM1P02763 201 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 BRD3OSQ6XYD6 125 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 Q8N9W7 124 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 SH2D1AO60880 128 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 IGLL1P15814 213 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
SLX4-202ENST00000466154 CTRLP40313 264 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 PAX2Q02962 417 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 Q6ZVH6 145 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 ERASQ7Z444 233 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 GFRA4Q9GZZ7 299 aa12.76□□□□□ -0.37
SLX4-202ENST00000466154 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 SMKR1H3BMG3 65 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
SLX4-202ENST00000466154 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
SLX4-202ENST00000466154 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 SOX21Q9Y651 276 aaPredicted RBP12.75□□□□□ -0.37
SLX4-202ENST00000466154 NPIPB6E9PJ23 425 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 J3KRW8 73 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 FA2HQ7L5A8 372 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 PKD1L2Q7Z442 2459 aa12.75□□□□□ -0.37
SLX4-202ENST00000466154 M0QZK8 103 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 HAX1O00165 279 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 SCGB2A1O75556 95 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 TWIST1Q15672 202 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 RNASE8Q8TDE3 154 aaKnown RBP12.74□□□□□ -0.37
SLX4-202ENST00000466154 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 CSPG4Q6UVK1 2322 aa12.74□□□□□ -0.37
SLX4-202ENST00000466154 TRAV9-2A0A087WT02 112 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 D6R8Y8 96 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 FAM106AQ4KMX7 169 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 DTX2Q86UW9 622 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 CACNA1AO00555 2505 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 CENPEQ02224 2701 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 NCR2O95944 276 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 EFNA4P52798 201 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 LYPD1Q8N2G4 141 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 LAMTOR2Q9Y2Q5 125 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 SNAI2O43623 268 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 PSG9Q00887 426 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 FAM162BQ5T6X4 162 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 MINOS1Q5TGZ0 78 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 STPG4Q8N801 248 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 MINOS1-NBL1R4GNA1 71 aa12.73□□□□□ -0.37
SLX4-202ENST00000466154 UTP20O75691 2785 aaKnown RBP12.72□□□□□ -0.37
SLX4-202ENST00000466154 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 SYS1-DBNDD2H3BUS1 97 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
SLX4-202ENST00000466154 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
SLX4-202ENST00000466154 LY6EQ16553 131 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 SMAD5-AS1Q9Y6J3 95 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 CELSR2Q9HCU4 2923 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 PRAC2D3DTV9 90 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 MAP1LC3CQ9BXW4 147 aa12.72□□□□□ -0.37
SLX4-202ENST00000466154 COL5A1-AS1Q5SY13 56 aa12.71□□□□□ -0.37
SLX4-202ENST00000466154 C20orf202A1L168 122 aa12.71□□□□□ -0.37
SLX4-202ENST00000466154 OR5AL1P0C617 328 aa12.71□□□□□ -0.37
SLX4-202ENST00000466154 TSPOP30536 169 aa12.71□□□□□ -0.37
SLX4-202ENST00000466154 Q8N6K4 173 aa12.71□□□□□ -0.37
SLX4-202ENST00000466154 PRR25Q96S07 402 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms