RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	CACNG7	P62955	275 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	SUPT4H1	P63272	117 aa	Known RBP	4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	FGL1	Q08830	312 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	NEDD8	Q15843	81 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	C1orf194	Q5T5A4	169 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	DHRS11	Q6UWP2	260 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	DPPA3	Q6W0C5	159 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	LYSMD2	Q8IV50	215 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	SLC24A4	Q8NFF2	622 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	OR51G1	Q8NGK1	321 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	GTSF1	Q8WW33	167 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	VGLL1	Q99990	258 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	DIABLO	Q9NR28	239 aa		4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.92	□□□□□ -1.62
NCSTN-209	ENST00000459963	IGKV2D-24	A0A075B6R9	120 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	TRGV4	A0A0C4DH28	118 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963		A0A0G2JRQ6	117 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	NXPH3	O95157	252 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	IGKV1-5	P01602	117 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	RD3L	P0DJH9	198 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	RNASE2	P10153	161 aa	Known RBP	4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	CBX5	P45973	191 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	HSPE1	P61604	102 aa	Known RBP	4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	LSM3	P62310	102 aa	Known RBP	4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	HIST1H1A	Q02539	215 aa	Predicted RBP	4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	SP6	Q3SY56	376 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	DGAT2L7P	Q6IED9	249 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	SH2D6	Q7Z4S9	175 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	SLC35G3	Q8N808	338 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	C11orf72	Q8NBR9	251 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	CLRN3	Q8NCR9	226 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	RAB2B	Q8WUD1	216 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	YIPF6	Q96EC8	236 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	ANAPC10	Q9UM13	185 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	USH2A	O75445	5202 aa		4.91	□□□□□ -1.62
NCSTN-209	ENST00000459963	IGKV1OR2-108	A0A075B7D4	117 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	GGTLC3	B5MD39	225 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963		H3BMQ9	156 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	GABARAP	O95166	117 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	PGAM2	P15259	253 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	SUB1	P53999	127 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	TAS2R46	P59540	309 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	TSPAN5	P62079	268 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	CNBP	P62633	177 aa	Known RBP	4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	GFI1B	Q5VTD9	330 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	OR8G2P	Q6IF36	304 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	SNX29P2	Q8IUI4	249 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	IQCF2	Q8IXL9	164 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	RNF182	Q8N6D2	247 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	SAMD12	Q8N8I0	201 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	PRR26	Q8N8Z3	221 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	CCDC71L	Q8N9Z2	235 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	ZNF680	Q8NEM1	530 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	TP53RK	Q96S44	253 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	KRTAP9-8	Q9BYQ0	159 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963	PLAC8	Q9NZF1	115 aa		4.9	□□□□□ -1.63
NCSTN-209	ENST00000459963		A0A0A6YYH2	397 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	CCDC160	A6NGH7	325 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963		A6NJ64	397 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	CHTF8	P0CG12	524 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	PSG1	P11464	419 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	RND2	P52198	227 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	AKR1C2	P52895	323 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	CTF1	Q16619	201 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	UBE2NL	Q5JXB2	153 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	GPR107	Q5VW38	600 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	DAZ4	Q86SG3	579 aa	Known RBP	4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	OR8I2	Q8N0Y5	310 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	ZNF738	Q8NE65	137 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	OR8A1	Q8NGG7	326 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	SPACA4	Q8TDM5	124 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	BORCS5	Q969J3	196 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	S100A16	Q96FQ6	103 aa	Known RBP	4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	PYGO2	Q9BRQ0	406 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	PBDC1	Q9BVG4	233 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	FUNDC2	Q9BWH2	189 aa		4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	NAA50	Q9GZZ1	169 aa	Known RBP	4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	DAZ3	Q9NR90	486 aa	Known RBP	4.89	□□□□□ -1.63
NCSTN-209	ENST00000459963	TRAV8-2	A0A0B4J237	113 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	INS-IGF2	F8WCM5	200 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	CRYGA	P11844	174 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	PRSS3	P35030	304 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	MEF2D	Q14814	521 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	TRIM16L	Q309B1	348 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	PRSS54	Q6PEW0	395 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	CROCCP3	Q8IVE0	287 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	NHLRC2	Q8NBF2	726 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	RNASE11	Q8TAA1	199 aa	Known RBP	4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963		Q8TAT8	98 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	GPX8	Q8TED1	209 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	RRNAD1	Q96FB5	475 aa	Known RBP	4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	ENY2	Q9NPA8	101 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	MRPL16	Q9NX20	251 aa	Known RBP	4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	COMMD3	Q9UBI1	195 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	KLF12	Q9Y4X4	402 aa		4.88	□□□□□ -1.63
NCSTN-209	ENST00000459963	LOC100131303	A0A0U1RQF7	123 aa		4.87	□□□□□ -1.63
NCSTN-209	ENST00000459963	SFTA3	P0C7M3	94 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms