RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CNFNQ9BYD5 112 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 SPTA1P02549 2419 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 USP9XQ93008 2570 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-202ENST00000459727 TNCP24821 2201 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 A0A1W2PRD5 423 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 A0A1W2PRF3 423 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 A0A1W2PRM7 423 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 CTSGP08311 255 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 IGLL1P15814 213 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 DLX1P56177 255 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 HIST1H1AQ02539 215 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-202ENST00000459727 LCN12Q6JVE5 192 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 OR1N2Q8NGR9 330 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 PRELID3AQ96N28 172 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 METTL26Q96S19 204 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 LENEPQ9Y5L5 61 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 PLCE1Q9P212 2302 aa6.91□□□□□ -1.3
HDAC3-202ENST00000459727 URB1O60287 2271 aaKnown RBP6.9□□□□□ -1.3
HDAC3-202ENST00000459727 OR2T8A6NH00 312 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 CYSRT1A8MQ03 144 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 H3BUA1 57 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 M0R3E3 92 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 BRI3O95415 125 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 G0S2P27469 103 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 CRIP2P52943 208 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-202ENST00000459727 NDPQ00604 133 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 UNQ5815/PRO19632Q6UWF5 114 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 C17orf77Q96MU5 243 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 TMUB1Q9BVT8 246 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 NXT2Q9NPJ8 142 aaKnown RBP6.9□□□□□ -1.3
HDAC3-202ENST00000459727 RAXQ9Y2V3 346 aa6.9□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF462Q96JM2 2506 aa6.9□□□□□ -1.31
HDAC3-202ENST00000459727 SVILO95425 2214 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 TEX15Q9BXT5 2789 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 NPFFO15130 113 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 HBDP02042 147 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 IGLC6P0CF74 106 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 CRIP1P50238 77 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 RHOGP84095 191 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 PRB3Q04118 309 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-202ENST00000459727 C15orf32Q32M92 178 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 KLF17Q5JT82 389 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-202ENST00000459727 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 ZNF747Q9BV97 191 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 MAP1LC3AQ9H492 121 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 MOB4Q9Y3A3 225 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 ARFGEF3Q5TH69 2177 aa6.89□□□□□ -1.31
HDAC3-202ENST00000459727 IGKV2-40A0A087WW87 121 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-202ENST00000459727 LINC01546A6NGU7 62 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 OVOL3O00110 214 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 BUB3O43684 328 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 IGKV2D-40P01614 121 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-202ENST00000459727 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-202ENST00000459727 GPR183P32249 361 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 CKS2P33552 79 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 SAA4P35542 130 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 CACNG7P62955 275 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 TMEM78Q5T7P6 136 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 C9orf139Q6ZV77 190 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 ZFAND3Q9H8U3 227 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 SCRT2Q9NQ03 307 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 COL12A1Q99715 3063 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 PTPN13Q12923 2485 aa6.88□□□□□ -1.31
HDAC3-202ENST00000459727 CENPVL3A0A0U1RRI6 287 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 D6R8Y8 96 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 NDUFS8O00217 210 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 SIVA1O15304 175 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 ATP6V0E1O15342 81 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 TCF21O43680 179 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 LY6HO94772 140 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 COX8AP10176 69 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 CD24P25063 80 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 ZNF138P52744 262 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 SEC11AP67812 179 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 ATP5G2Q06055 141 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 TWIST1Q15672 202 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 ECSCRQ19T08 205 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 STPG4Q8N801 248 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 OR9G4Q8NGQ1 327 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 UBTD1Q9HAC8 227 aa6.87□□□□□ -1.31
HDAC3-202ENST00000459727 ATMQ13315 3056 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 APC2O95996 2303 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 TRBV7-9A0A0J9YWB2 115 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 M0QZ24 198 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 ORM1P02763 201 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 CSN3P07498 182 aa6.86□□□□□ -1.31
HDAC3-202ENST00000459727 ZFP36P26651 326 aaKnown RBP6.86□□□□□ -1.31
HDAC3-202ENST00000459727 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-202ENST00000459727 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
HDAC3-202ENST00000459727 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms