RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 IGFL3Q6UXB1 125 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 OR5AS1Q8N127 324 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 FAM216BQ8N7L0 139 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 CCL4L1Q8NHW4 92 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 C10orf82Q8WW14 230 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 C16orf74Q96GX8 76 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 S100A13Q99584 98 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 SCN8AQ9UQD0 1980 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 MYO5AQ9Y4I1 1855 aaKnown RBP2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 KNDC1Q76NI1 1749 aa2.65□□□□□ -1.98
HMGB3P30-201ENST00000457863 TNRC6AQ8NDV7 1962 aaKnown RBP2.65□□□□□ -1.98
HMGB3P30-201ENST00000457863 PLXNA3P51805 1871 aa2.65□□□□□ -1.98
HMGB3P30-201ENST00000457863 RGPD3A6NKT7 1758 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 A6NDX4 124 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 ZFP92A6NM28 416 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 COLCA2A8K830 154 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 C17orf51A8MQB3 221 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 SH2D1AO60880 128 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 ZNF737O75373 536 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 HYPMO75409 117 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 NDUFB6O95139 128 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 IGHV1-69P01742 117 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 TRGV3P03979 118 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 GIG44P09565 113 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 FABP4P15090 132 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 FUSP35637 526 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 PCBD1P61457 104 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 SYCNQ0VAF6 134 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 CDK5R1Q15078 307 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 KHDC3LQ587J8 217 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 FP248Q71RG6 208 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 Q8N9W7 124 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 DSCR8Q96T75 97 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 TAS2R4Q9NYW5 299 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 PTPRSQ13332 1948 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 USP54Q70EL1 1684 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 ABCC5O15440 1437 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 CASKIN1Q8WXD9 1431 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 LAMC3Q9Y6N6 1575 aa2.65□□□□□ -1.99
HMGB3P30-201ENST00000457863 HEATR5AQ86XA9 2040 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 ARHGEF12Q9NZN5 1544 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SCN9AQ15858 1988 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 A0A1W2PP18 115 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 GRIFINA4D1Z8 144 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 RBAKDNA6NC62 111 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 PINLYPA6NC86 204 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 C19orf71A6NCJ1 209 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 A6NED7 52 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 FAM24AA6NFZ4 105 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 A6NN06 94 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SDCBPO00560 298 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 LY6HO94772 140 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 TCL1BO95988 128 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 IGLV2-11P01706 119 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 APOC3P02656 99 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 NMBP08949 121 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SAA1P0DJI8 122 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SLC25A4P12235 298 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 BLCAPP62952 87 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SS18Q15532 418 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MIAQ16674 131 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MRGPRG-AS1Q2M3A8 158 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 ZNF322Q6U7Q0 402 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 ALKAL2Q6UX46 152 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SMCR5Q8TEV8 140 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 CLEC2BQ92478 149 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 FGF13Q92913 245 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 POP5Q969H6 163 aaKnown RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MRPS24Q96EL2 167 aaKnown RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 ZNRD1Q9P1U0 126 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SUPT6HQ7KZ85 1726 aaKnown RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 WDR90Q96KV7 1748 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 NYNRINQ9P2P1 1898 aaKnown RBP2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 SHROOM2Q13796 1616 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MROH1Q8NDA8 1641 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 STRCQ7RTU9 1775 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MYH4Q9Y623 1939 aa2.64□□□□□ -1.99
HMGB3P30-201ENST00000457863 MYO9BQ13459 2157 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 PLXNA4Q9HCM2 1894 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 ZNF407Q9C0G0 2248 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 IGHV3-64DA0A0J9YX35 117 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 TMEM223A0PJW6 202 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 H3BMM0 161 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 PDCD5O14737 125 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 SSSCA1O60232 199 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 MSMBP08118 114 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 COX7CP15954 63 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 SUPT4H1P63272 117 aaKnown RBP2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 CIRBPQ14011 172 aaKnown RBP2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 TDRG1Q3Y452 100 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 ASB16-AS1Q495Z4 193 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 C2orf83Q53S99 150 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 LINC01560Q8TB33 94 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 UBE2WQ96B02 151 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 SDF2L1Q9HCN8 221 aa2.63□□□□□ -1.99
HMGB3P30-201ENST00000457863 SMCO4Q9NRQ5 59 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms