RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NDFIP1Q9BT67 221 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 TMEM14CQ9P0S9 112 aa10.19□□□□□ -0.78
SHC1-210ENST00000448116 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
SHC1-210ENST00000448116 ZNF785A8K8V0 405 aa10.18□□□□□ -0.78
SHC1-210ENST00000448116 K7ERU9 68 aa10.18□□□□□ -0.78
SHC1-210ENST00000448116 HAX1O00165 279 aa10.18□□□□□ -0.78
SHC1-210ENST00000448116 AP5S1Q9NUS5 200 aa10.18□□□□□ -0.78
SHC1-210ENST00000448116 FXYD7P58549 80 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 SLC25A34Q6PIV7 304 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 NPIPB6E9PJ23 425 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 NBR2O15453 112 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 IGFL4Q6B9Z1 124 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 FAM231BA6NCW3 169 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 FOXC1Q12948 553 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 AAMDCQ9H7C9 122 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 DPM3Q9P2X0 92 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 ATRXP46100 2492 aa10.17□□□□□ -0.78
SHC1-210ENST00000448116 H3BRN7 92 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 CRIP1P50238 77 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 PSG3Q16557 428 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 ST20Q9HBF5 79 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 CKS1BP61024 79 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 TMEM213A2RRL7 107 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 NEU4Q8WWR8 484 aaPredicted RBP10.16□□□□□ -0.78
SHC1-210ENST00000448116 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
SHC1-210ENST00000448116 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.78
SHC1-210ENST00000448116 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.78
SHC1-210ENST00000448116 FAM106CPP0CH98 169 aa10.15□□□□□ -0.78
SHC1-210ENST00000448116 CSN1S1P47710 185 aa10.15□□□□□ -0.78
SHC1-210ENST00000448116 TCF15Q12870 199 aa10.15□□□□□ -0.78
SHC1-210ENST00000448116 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
SHC1-210ENST00000448116 RELNP78509 3460 aa10.15□□□□□ -0.78
SHC1-210ENST00000448116 A0A087X0K7 114 aa10.15□□□□□ -0.79
SHC1-210ENST00000448116 TMEM189A5PLL7 270 aa10.15□□□□□ -0.79
SHC1-210ENST00000448116 IFI27P40305 119 aaPredicted RBP10.15□□□□□ -0.79
SHC1-210ENST00000448116 LYZL1Q6UWQ5 148 aa10.15□□□□□ -0.79
SHC1-210ENST00000448116 TMEM75Q8N9X5 138 aa10.15□□□□□ -0.79
SHC1-210ENST00000448116 GATA3P23771 443 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 PET117Q6UWS5 81 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 CSMD1Q96PZ7 3565 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 OR2T8A6NH00 312 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 D6R8Y8 96 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 LY6LH3BQJ8 138 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 CRXO43186 299 aaPredicted RBP10.14□□□□□ -0.79
SHC1-210ENST00000448116 MFAP4P55083 255 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 Q8TAT8 98 aa10.14□□□□□ -0.79
SHC1-210ENST00000448116 NCR2O95944 276 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 LOXL1Q08397 574 aaPredicted RBP10.13□□□□□ -0.79
SHC1-210ENST00000448116 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 VKORC1Q9BQB6 163 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 IGF2RP11717 2491 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 PAX2Q02962 417 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 RNF5Q99942 180 aa10.13□□□□□ -0.79
SHC1-210ENST00000448116 IGHV2-70DA0A0C4DH43 119 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 SMKR1H3BMG3 65 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 AZU1P20160 251 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 TIMD4Q96H15 378 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 NPIPB5A8MRT5 1133 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 SH2D1AO60880 128 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 HOXB4P17483 251 aaPredicted RBP10.12□□□□□ -0.79
SHC1-210ENST00000448116 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 SRSF8Q9BRL6 282 aaKnown RBP10.12□□□□□ -0.79
SHC1-210ENST00000448116 C21orf62Q9NYP8 219 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 CCL21O00585 134 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 FANCD2OSQ96PS1 177 aa10.12□□□□□ -0.79
SHC1-210ENST00000448116 SPTAN1Q13813 2472 aaKnown RBP10.11□□□□□ -0.79
SHC1-210ENST00000448116 TRBV7-9A0A0J9YWB2 115 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 ARPC1AQ92747 370 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 ZNF747Q9BV97 191 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 RAB1BQ9H0U4 201 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 NDPQ00604 133 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 BVES-AS1Q5T3Y7 98 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 DCHS2Q6V1P9 2916 aa10.11□□□□□ -0.79
SHC1-210ENST00000448116 OVOL3O00110 214 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 ARL3P36405 182 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 TWIST1Q15672 202 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 CFHR4Q92496 578 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 WI2-2373I1.2A0A1W2PRP0 233 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 MRPS12O15235 138 aaKnown RBP10.1□□□□□ -0.79
SHC1-210ENST00000448116 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 SIGLEC8Q9NYZ4 499 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 ORM1P02763 201 aa10.1□□□□□ -0.79
SHC1-210ENST00000448116 FOXE3Q13461 319 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms