RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 LINC01548A6NM66 108 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 M0R1W7 72 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 ECSCRQ19T08 205 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 FAM162BQ5T6X4 162 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 C12orf54Q6X4T0 127 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
NLE1-202ENST00000442241 CHRDL1Q9BU40 450 aa12.59□□□□□ -0.39
NLE1-202ENST00000442241 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 CSN3P07498 182 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 LINC00173Q6ZV60 143 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 ZNF414Q96IQ9 312 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 MCRIP2Q9BUT9 160 aaKnown RBP12.58□□□□□ -0.4
NLE1-202ENST00000442241 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
NLE1-202ENST00000442241 IGHV1-24A0A0C4DH33 117 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
NLE1-202ENST00000442241 CRIP1P50238 77 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
NLE1-202ENST00000442241 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.4
NLE1-202ENST00000442241 BPESC1Q9GZL8 116 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 SCRT2Q9NQ03 307 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 PSG8Q9UQ74 426 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
NLE1-202ENST00000442241 MFAP4P55083 255 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 PAX2Q02962 417 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 ZNF562Q6V9R5 426 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 TMUB1Q9BVT8 246 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 C21orf62Q9NYP8 219 aa12.57□□□□□ -0.4
NLE1-202ENST00000442241 IGHV3-49A0A0A0MS15 119 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 MRPS12O15235 138 aaKnown RBP12.56□□□□□ -0.4
NLE1-202ENST00000442241 Q8TAT8 98 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 WI2-2373I1.2A0A1W2PRP0 233 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 H0Y8G0 127 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 CHEK1O14757 476 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 CD5LO43866 347 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 PSG9Q00887 426 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
NLE1-202ENST00000442241 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
NLE1-202ENST00000442241 G3V318 75 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 GNLYP22749 145 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 FLNCQ14315 2725 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 PKD1L2Q7Z442 2459 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
NLE1-202ENST00000442241 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 GPR183P32249 361 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 Q8N9W7 124 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 SIRPDQ9H106 197 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 ZNF207O43670 478 aaKnown RBP12.54□□□□□ -0.4
NLE1-202ENST00000442241 SAA4P35542 130 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 PSG3Q16557 428 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
NLE1-202ENST00000442241 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 K7ERU9 68 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 CTSGP08311 255 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 HIST1H1AQ02539 215 aaPredicted RBP12.53□□□□□ -0.4
NLE1-202ENST00000442241 Q8N6K4 173 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 HSBP1L1C9JCN9 74 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 OVOL3O00110 214 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 TTC9CQ8N5M4 171 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 SMIM12Q96EX1 92 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
NLE1-202ENST00000442241 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
NLE1-202ENST00000442241 SOX21Q9Y651 276 aaPredicted RBP12.53□□□□□ -0.4
NLE1-202ENST00000442241 ATP6V0E1O15342 81 aa12.52□□□□□ -0.4
NLE1-202ENST00000442241 CCDC144NLQ6NUI1 221 aa12.52□□□□□ -0.4
NLE1-202ENST00000442241 PET117Q6UWS5 81 aa12.52□□□□□ -0.4
NLE1-202ENST00000442241 AJUBAQ96IF1 538 aa12.52□□□□□ -0.4
NLE1-202ENST00000442241 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.4
NLE1-202ENST00000442241 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.41
NLE1-202ENST00000442241 OR5AL1P0C617 328 aa12.52□□□□□ -0.41
NLE1-202ENST00000442241 C15orf32Q32M92 178 aa12.52□□□□□ -0.41
NLE1-202ENST00000442241 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
NLE1-202ENST00000442241 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
NLE1-202ENST00000442241 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
NLE1-202ENST00000442241 APOHP02749 345 aaPredicted RBP12.51□□□□□ -0.41
NLE1-202ENST00000442241 CT83Q5H943 113 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 VGLL1Q99990 258 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 A0A087X0K7 114 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
NLE1-202ENST00000442241 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 RNF182Q8N6D2 247 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 TMEM75Q8N9X5 138 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 PMCHL2Q9BQD1 86 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 AAMDCQ9H7C9 122 aa12.51□□□□□ -0.41
NLE1-202ENST00000442241 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 CLEC3BP05452 202 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
NLE1-202ENST00000442241 SELENOKQ9Y6D0 94 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 K7EQM0 130 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 FXYD7P58549 80 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 ERCC8Q13216 396 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms