RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 CACNA1CQ13936 2221 aa-0.29□□□□□ -2.46
LINC01239-201ENST00000433645 N4BP2Q86UW6 1770 aaPredicted RBP-0.29□□□□□ -2.46
LINC01239-201ENST00000433645 UHRF1BP1Q6BDS2 1440 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 UNC79Q9P2D8 2635 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 KDM6BO15054 1643 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 CAMSAP1Q5T5Y3 1602 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 CELSR1Q9NYQ6 3014 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 ODAMA1E959 279 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 HIST1H2BKO60814 126 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 PIAS1O75925 651 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 IFNA14P01570 189 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 HIST1H2BJP06899 126 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 CTXN2P0C2S0 81 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 IDO1P14902 403 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 ARPP19P56211 112 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 OR2J1Q9GZK6 312 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 ARMC1Q9NVT9 282 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 ARL2BPQ9Y2Y0 163 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 CAMSAP2Q08AD1 1489 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 ASXL3Q9C0F0 2248 aa-0.3□□□□□ -2.46
LINC01239-201ENST00000433645 POLQO75417 2590 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 UBR5O95071 2799 aaPredicted RBP-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 RER1O15258 196 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 BANF1O75531 89 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 SERPINA1P01009 418 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 TRGC2P03986 189 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 INSL3P51460 131 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 RPL37P61927 97 aaKnown RBP-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 PHF5AQ7RTV0 110 aaKnown RBP-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 LIMD2Q9BT23 127 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 C9orf16Q9BUW7 83 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 PYCARDQ9ULZ3 195 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 ASB4Q9Y574 426 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 ANK2Q01484 3957 aa-0.31□□□□□ -2.46
LINC01239-201ENST00000433645 ATG2AQ2TAZ0 1938 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 TMBIM6P55061 237 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 ASB16-AS1Q495Z4 193 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 XAF1Q6GPH4 301 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 LINC00269Q8N2A0 174 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 C5orf17Q8NAS9 161 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 GRPEL2Q8TAA5 225 aa-0.32□□□□□ -2.46
LINC01239-201ENST00000433645 ADGBQ8N7X0 1667 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 CTTNBP2Q8WZ74 1663 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 SULT1C4O75897 302 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 CXCL1P09341 107 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 FKBP1CQ5VVH2 108 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 CASC2Q6XLA1 102 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 ANGPTL5Q86XS5 388 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 FAM216BQ8N7L0 139 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 GPX7Q96SL4 187 aaPredicted RBP-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 PRNDQ9UKY0 176 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 CD109Q6YHK3 1445 aa-0.33□□□□□ -2.46
LINC01239-201ENST00000433645 SYNE2Q8WXH0 6885 aaKnown RBP-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 PRORSD1PA6NEY8 169 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 LY6G6CO95867 125 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 APOA2P02652 100 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 OGNP20774 298 aaKnown RBP-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 DIAPH2-AS1Q14236 149 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 GLYATL3Q5SZD4 288 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 KIAA1107Q9UPP5 1409 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 KIAA1549LQ6ZVL6 1849 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 RTL9Q8NET4 1388 aa-0.34□□□□□ -2.46
LINC01239-201ENST00000433645 ADGRL3Q9HAR2 1447 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 RIIAD1A6NNX1 92 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 G3V2T6 193 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 H7C1C5 153 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 K7ERJ3 54 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 EVI2AP22794 236 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 LCN6P62502 163 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 C1orf140Q5VVS0 124 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 ZCCHC23Q6ZST2 131 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 DEFB132Q7Z7B7 95 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 NUP35Q8NFH5 326 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 RTL8AQ9BWD3 113 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 SH3BGRL3Q9H299 93 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 LYRM2Q9NU23 88 aaPredicted RBP-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 NAT8BQ9UHF3 227 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 RBBP6Q7Z6E9 1792 aaKnown RBP-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 JMJD1CQ15652 2540 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 FSIP2Q5CZC0 6907 aa-0.35□□□□□ -2.47
LINC01239-201ENST00000433645 CST7O76096 145 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 SPINK1P00995 79 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 RPL35P42766 123 aaKnown RBP-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 HBBP68871 147 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 FADDQ13158 208 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 VMA21Q3ZAQ7 101 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 Q5BKY6 102 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 AKR1C8PQ5T2L2 129 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 MALSU1Q96EH3 234 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 MCEEQ96PE7 176 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 EFCAB11Q9BUY7 163 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 OR2H1Q9GZK4 316 aa-0.36□□□□□ -2.47
LINC01239-201ENST00000433645 NSD1Q96L73 2696 aaPredicted RBP-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 CD3DP04234 171 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 IFNA6P05013 189 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 GYPBP06028 91 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 RPS3P23396 243 aaKnown RBP eCLIP-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 PHBP35232 272 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 REEP5Q00765 189 aa-0.37□□□□□ -2.47
LINC01239-201ENST00000433645 CCL4L1Q8NHW4 92 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms