RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 FAM223BA6NKX1 122 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 H0YIZ8 118 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 FAM223AQ8IWN6 122 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 FAM236AA0A1B0GUQ0 79 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 FAM236BA0A1B0GV22 79 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 IGHV1-2P23083 117 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 CDKN1BP46527 198 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 Q8N8P6 123 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 IGHV4-28A0A0C4DH34 117 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 CFHR2P36980 270 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 MALRD1Q5VYJ5 2156 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 CELA3AP09093 270 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 BCORQ6W2J9 1755 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 A0A0B4J2C4 111 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 RPP25LQ8N5L8 163 aaKnown RBP13.43□□□□□ -0.26
RIF1-204ENST00000430328 CELA3BP08861 270 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 PPP1R32Q7Z5V6 425 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 TMEM75Q8N9X5 138 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 RNASE6Q93091 150 aaKnown RBP13.43□□□□□ -0.26
RIF1-204ENST00000430328 K7ERJ3 54 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
RIF1-204ENST00000430328 SLC22A18ASQ8N1D0 253 aa13.43□□□□□ -0.26
RIF1-204ENST00000430328 NCOA6Q14686 2063 aaPredicted RBP13.43□□□□□ -0.26
RIF1-204ENST00000430328 NPYP01303 97 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 F8VRH5 84 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 DKK1O94907 266 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 IGHV2-26A0A0B4J1V2 119 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 MINOS1Q5TGZ0 78 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 ZNF329Q86UD4 541 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 MINOS1-NBL1R4GNA1 71 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 NREPQ16612 68 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
RIF1-204ENST00000430328 PLXND1Q9Y4D7 1925 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 LYL1P12980 280 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 C19orf48Q6RUI8 117 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 VSIG2Q96IQ7 327 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 PRSS46E5RG02 174 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 SIVA1O15304 175 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 PAPPA2Q9BXP8 1791 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 CFHR3Q02985 330 aa13.41□□□□□ -0.26
RIF1-204ENST00000430328 IGHV3-16A0A0C4DH30 117 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 ANGP03950 147 aaKnown RBP13.4□□□□□ -0.26
RIF1-204ENST00000430328 BTCP35070 178 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 LY75O60449 1722 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 C18orf32Q8TCD1 76 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
RIF1-204ENST00000430328 WBP1Q96G27 269 aa13.4□□□□□ -0.26
RIF1-204ENST00000430328 J3QQQ9 107 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 C12orf74Q32Q52 190 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 MRPL23Q16540 153 aaKnown RBP13.39□□□□□ -0.27
RIF1-204ENST00000430328 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
RIF1-204ENST00000430328 IGKV3D-7A0A0C4DH55 119 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 SHISA3A0PJX4 238 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 M0R1W7 72 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 DSCR9P59020 149 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 Q86TA4 180 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 AMTNQ6UX39 209 aa13.39□□□□□ -0.27
RIF1-204ENST00000430328 C4orf48Q5BLP8 95 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 RNF5Q99942 180 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 ETDCA0A1B0GVM5 59 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 CFPP27918 469 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 IGHV1-3A0A0C4DH29 117 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 RFPL3SP0C7P2 107 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 HELZP42694 1942 aaKnown RBP13.38□□□□□ -0.27
RIF1-204ENST00000430328 SRSF2Q01130 221 aaKnown RBP13.38□□□□□ -0.27
RIF1-204ENST00000430328 SDHAF1A6NFY7 115 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
RIF1-204ENST00000430328 DKK4Q9UBT3 224 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 OOSP1A8MZH6 123 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 HIGD2BQ4VC39 106 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 TNRC6BQ9UPQ9 1833 aaKnown RBP13.37□□□□□ -0.27
RIF1-204ENST00000430328 LINC01545Q5VT33 79 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 CREBBPQ92793 2442 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 ATP1A1-AS1Q5TC04 95 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 CHCHD2Q9Y6H1 151 aaPredicted RBP13.37□□□□□ -0.27
RIF1-204ENST00000430328 C5orf64Q2M2E5 130 aa13.37□□□□□ -0.27
RIF1-204ENST00000430328 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 IGHV1OR15-1A0A075B7D0 117 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
RIF1-204ENST00000430328 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 NTN3O00634 580 aaPredicted RBP13.36□□□□□ -0.27
RIF1-204ENST00000430328 WISP3O95389 354 aaPredicted RBP13.36□□□□□ -0.27
RIF1-204ENST00000430328 SMIM10L1P0DMW3 83 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 SLC25A45Q8N413 288 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 SMIM10Q96HG1 83 aa13.36□□□□□ -0.27
RIF1-204ENST00000430328 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms