RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 LOC102724200A0A096LPH7 203 aaPredicted RBP10.64□□□□□ -0.71
THBS3-202ENST00000428962 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
THBS3-202ENST00000428962 M0R2Z0 102 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 APOHP02749 345 aaPredicted RBP10.64□□□□□ -0.71
THBS3-202ENST00000428962 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 C10orf105Q8TEF2 133 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
THBS3-202ENST00000428962 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 DCHS2Q6V1P9 2916 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 FLNCQ14315 2725 aa10.64□□□□□ -0.71
THBS3-202ENST00000428962 ZNF785A8K8V0 405 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 CLEC3BP05452 202 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 C8orf49Q96NF6 230 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
THBS3-202ENST00000428962 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 IGKV2D-40P01614 121 aaPredicted RBP10.63□□□□□ -0.71
THBS3-202ENST00000428962 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 CRIP2P52943 208 aaPredicted RBP10.63□□□□□ -0.71
THBS3-202ENST00000428962 MRPL52Q86TS9 123 aaKnown RBP10.63□□□□□ -0.71
THBS3-202ENST00000428962 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 Q8N976 141 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 SMAD5-AS1Q9Y6J3 95 aa10.63□□□□□ -0.71
THBS3-202ENST00000428962 TRAV40A0A0B4J280 105 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 IGHV4-61A0A0C4DH41 118 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 TMEM189A5PLL7 270 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 FAM181BA6NEQ2 426 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 G3V318 75 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 TCAPO15273 167 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 BMI1P35226 326 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 CRIP1P50238 77 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
THBS3-202ENST00000428962 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 CLEC19AQ6UXS0 136 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 Q71RC1 249 aaPredicted RBP10.62□□□□□ -0.71
THBS3-202ENST00000428962 RNF114Q9Y508 228 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 LRRK2Q5S007 2527 aa10.62□□□□□ -0.71
THBS3-202ENST00000428962 DOPEY2Q9Y3R5 2298 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 TRAV41A0A0B4J266 112 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 BUB3O43684 328 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 SH2D1AO60880 128 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 PRR25Q96S07 402 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 METTL26Q96S19 204 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 MEGF9Q9H1U4 602 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 WNK2Q9Y3S1 2297 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 IGHV3-35A0A0C4DH35 117 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 ATP5J2P56134 94 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 NUTF2P61970 127 aaKnown RBP10.61□□□□□ -0.71
THBS3-202ENST00000428962 TMEM219Q86XT9 240 aa10.61□□□□□ -0.71
THBS3-202ENST00000428962 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
THBS3-202ENST00000428962 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
THBS3-202ENST00000428962 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
THBS3-202ENST00000428962 ASCL2Q99929 193 aa10.6□□□□□ -0.71
THBS3-202ENST00000428962 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 IGHV3OR16-8A0A075B7F1 116 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 LINC01548A6NM66 108 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 M0R143 59 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
THBS3-202ENST00000428962 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 C19orf54Q5BKX5 351 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 LCN12Q6JVE5 192 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
THBS3-202ENST00000428962 COL12A1Q99715 3063 aa10.58□□□□□ -0.71
THBS3-202ENST00000428962 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 LINC00614P0C842 121 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 BRD3OSQ6XYD6 125 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
THBS3-202ENST00000428962 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
THBS3-202ENST00000428962 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
THBS3-202ENST00000428962 A1L4Q6 167 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 M0QZK8 103 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 IGHG4P01861 327 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 MSMBP08118 114 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 SPATA45Q537H7 98 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 KLHDC1Q8N7A1 406 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 SPOCK3Q9BQ16 436 aa10.58□□□□□ -0.72
THBS3-202ENST00000428962 H3BUA1 57 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 TRGV3P03979 118 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 IGF1P05019 195 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
THBS3-202ENST00000428962 DSCR9P59020 149 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 Q8TAT8 98 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 VGLL1Q99990 258 aa10.57□□□□□ -0.72
THBS3-202ENST00000428962 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms