RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 H2BFWTQ7Z2G1 175 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 TTC9CQ8N5M4 171 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 GPR82Q96P67 336 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 TMEM133Q9H2Q1 129 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 SERTAD4Q9NUC0 356 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 ZNRD1Q9P1U0 126 aa9.06□□□□□ -0.96
CECR3-201ENST00000428828 IGHV3OR16-10A0A075B7F0 116 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 SMIM13P0DJ93 91 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 MGST1P10620 155 aaKnown RBP9.05□□□□□ -0.96
CECR3-201ENST00000428828 HBBP68871 147 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 PIFOQ8TCI5 191 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 SMR3AQ99954 134 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 CSPG4Q6UVK1 2322 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 TRAV40A0A0B4J280 105 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 RBP4P02753 201 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
CECR3-201ENST00000428828 PAX8Q06710 450 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 ABHD12Q8N2K0 398 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
CECR3-201ENST00000428828 PRTN3P24158 256 aa9.04□□□□□ -0.96
CECR3-201ENST00000428828 ZNF134P52741 427 aa9.04□□□□□ -0.96
CECR3-201ENST00000428828 STPG3Q8N7X2 389 aa9.04□□□□□ -0.96
CECR3-201ENST00000428828 ZNF502Q8TBZ5 544 aa9.04□□□□□ -0.96
CECR3-201ENST00000428828 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
CECR3-201ENST00000428828 AVPP01185 164 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 GATA3P23771 443 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
CECR3-201ENST00000428828 TAS2R45P59539 299 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 KRTAP1-1Q07627 177 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 ZNF747Q9BV97 191 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 PSG5Q15238 335 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 LGALS9BQ3B8N2 356 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 TMEM30BQ3MIR4 351 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 LGALS9CQ6DKI2 356 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 HCP5Q6MZN7 132 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 OR10X1Q8NGY0 326 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 OR9G1Q8NH87 305 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
CECR3-201ENST00000428828 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 HIVEP1P15822 2718 aa9.03□□□□□ -0.96
CECR3-201ENST00000428828 TEX50A0A1B0GTY4 177 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
CECR3-201ENST00000428828 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 GPR12P47775 334 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 RPL30P62888 115 aaKnown RBP9.02□□□□□ -0.97
CECR3-201ENST00000428828 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 RUSC1-AS1Q66K80 236 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
CECR3-201ENST00000428828 ZFHX3Q15911 3703 aa9.02□□□□□ -0.97
CECR3-201ENST00000428828 CENPVL3A0A0U1RRI6 287 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 CSN1S1P47710 185 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 ZNF816Q0VGE8 651 aaPredicted RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 ZNF355PQ9NSJ1 428 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 SONP18583 2426 aaKnown RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 E9PLD3 99 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 J3QLI3 93 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 CA1P00915 261 aaPredicted RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 GAGE5Q13069 117 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 GAGE6Q13070 117 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 FOXE3Q13461 319 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 RPL39P5Q59GN2 51 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 SLC25A48Q6ZT89 311 aaKnown RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 Q71RC1 249 aaPredicted RBP9.01□□□□□ -0.97
CECR3-201ENST00000428828 IFI27L2Q9H2X8 130 aa9.01□□□□□ -0.97
CECR3-201ENST00000428828 SLC25A17O43808 307 aa9□□□□□ -0.97
CECR3-201ENST00000428828 RBMXL2O75526 392 aaKnown RBP9□□□□□ -0.97
CECR3-201ENST00000428828 LY6G6DO95868 133 aa9□□□□□ -0.97
CECR3-201ENST00000428828 SAA2P0DJI9 122 aaPredicted RBP9□□□□□ -0.97
CECR3-201ENST00000428828 DUTP33316 252 aaKnown RBP9□□□□□ -0.97
CECR3-201ENST00000428828 RPS16P62249 146 aaKnown RBP9□□□□□ -0.97
CECR3-201ENST00000428828 MIR17HGQ75NE6 70 aa9□□□□□ -0.97
CECR3-201ENST00000428828 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
CECR3-201ENST00000428828 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
CECR3-201ENST00000428828 ZNF503Q96F45 646 aa9□□□□□ -0.97
CECR3-201ENST00000428828 TMUB1Q9BVT8 246 aa9□□□□□ -0.97
CECR3-201ENST00000428828 MRPL32Q9BYC8 188 aaKnown RBP9□□□□□ -0.97
CECR3-201ENST00000428828 VCX2Q9H322 139 aa9□□□□□ -0.97
CECR3-201ENST00000428828 PLEKHA3Q9HB20 300 aa9□□□□□ -0.97
CECR3-201ENST00000428828 PSG8Q9UQ74 426 aa9□□□□□ -0.97
CECR3-201ENST00000428828 IGHV1-69DA0A0B4J2H0 117 aa8.99□□□□□ -0.97
CECR3-201ENST00000428828 A8MWL6 223 aa8.99□□□□□ -0.97
CECR3-201ENST00000428828 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
CECR3-201ENST00000428828 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms