RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ARPC1AQ92747 370 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 LOC105371242A0A075B767 164 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 TCTAP57738 103 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 PET117Q6UWS5 81 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 SCRT2Q9NQ03 307 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 ZNF747Q9BV97 191 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
CDH1-202ENST00000422392 A0A087X0K7 114 aa12.33□□□□□ -0.43
CDH1-202ENST00000422392 TMEM189A5PLL7 270 aa12.33□□□□□ -0.43
CDH1-202ENST00000422392 ODF3BA8MYP8 253 aa12.33□□□□□ -0.43
CDH1-202ENST00000422392 CEACAM3P40198 252 aa12.33□□□□□ -0.43
CDH1-202ENST00000422392 OR8A1Q8NGG7 326 aa12.33□□□□□ -0.43
CDH1-202ENST00000422392 A0A096LNJ9 63 aa12.33□□□□□ -0.44
CDH1-202ENST00000422392 ZNF80P51504 273 aaPredicted RBP12.33□□□□□ -0.44
CDH1-202ENST00000422392 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
CDH1-202ENST00000422392 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 RELQ04864 619 aaPredicted RBP12.32□□□□□ -0.44
CDH1-202ENST00000422392 UBE2V1Q13404 147 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 VGLL1Q99990 258 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 SIGLEC8Q9NYZ4 499 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 TRAV30A0A087WSZ9 112 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 NPIPB5A8MRT5 1133 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 PRTN3P24158 256 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 NBL1P41271 181 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 CSN1S1P47710 185 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 TIMD4Q96H15 378 aa12.32□□□□□ -0.44
CDH1-202ENST00000422392 EGR2P11161 476 aaPredicted RBP12.31□□□□□ -0.44
CDH1-202ENST00000422392 PDE6HQ13956 83 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 GATD1Q8NB37 220 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 CTSGP08311 255 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 PRELID3AQ96N28 172 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 PRR25Q96S07 402 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 SMAD5-AS1Q9Y6J3 95 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 HIVEP3Q5T1R4 2406 aa12.31□□□□□ -0.44
CDH1-202ENST00000422392 ZNF493Q6ZR52 646 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
CDH1-202ENST00000422392 NDUFS7O75251 213 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 IGHG4P01861 327 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 ZFP36P26651 326 aaKnown RBP12.3□□□□□ -0.44
CDH1-202ENST00000422392 MRPL51Q4U2R6 128 aaKnown RBP12.3□□□□□ -0.44
CDH1-202ENST00000422392 FAM104BQ5XKR9 115 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 Q6AWC8 147 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 TTC9CQ8N5M4 171 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 SPTBN4Q9H254 2564 aa12.3□□□□□ -0.44
CDH1-202ENST00000422392 TAX1BP3O14907 124 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 VAMP3Q15836 100 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 A0A1B0GW15 77 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 CBY3A6NI87 242 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 M0R1W7 72 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
CDH1-202ENST00000422392 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 PSG9Q00887 426 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 TWIST1Q15672 202 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 FBXL19-AS1Q494R0 122 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 IGHV7-81A0A0B4J1V7 117 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 TMEM11P17152 192 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 RPL7P18124 248 aaKnown RBP12.28□□□□□ -0.44
CDH1-202ENST00000422392 ERCC8Q13216 396 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 ZNF575Q86XF7 245 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
CDH1-202ENST00000422392 GAS8-AS1O95177 125 aa12.27□□□□□ -0.44
CDH1-202ENST00000422392 NPYP01303 97 aa12.27□□□□□ -0.44
CDH1-202ENST00000422392 RHOGP84095 191 aa12.27□□□□□ -0.44
CDH1-202ENST00000422392 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.44
CDH1-202ENST00000422392 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.44
CDH1-202ENST00000422392 GPR183P32249 361 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 ECSCRQ19T08 205 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 RNF182Q8N6D2 247 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 Q8N6K4 173 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
CDH1-202ENST00000422392 MS4A6AQ9H2W1 248 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 THYN1Q9P016 225 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 CHD8Q9HCK8 2581 aa12.27□□□□□ -0.45
CDH1-202ENST00000422392 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 PRAC2D3DTV9 90 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 SFTPCP11686 197 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 C11orf71Q6IPW1 123 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 ORM1P02763 201 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 PPIFP30405 207 aaKnown RBP12.26□□□□□ -0.45
CDH1-202ENST00000422392 CACNG7P62955 275 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 FER1L6-AS1Q8NA97 138 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
CDH1-202ENST00000422392 MSRB2Q9Y3D2 182 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms