RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PAFAH1B2P68402 229 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 Q0VG73 95 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
DDX56-203ENST00000421223 KIR2DL5AQ8N109 375 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 ABCA2Q9BZC7 2435 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
DDX56-203ENST00000421223 LTAP01374 205 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 TDRG1Q3Y452 100 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 Q8N6K4 173 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 MAPK1IP1LQ8NDC0 245 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 Q8TAT8 98 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 GTSF1Q8WW33 167 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 ZNF414Q96IQ9 312 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 PSG8Q9UQ74 426 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 TBL2Q9Y4P3 447 aaKnown RBP8.56□□□□□ -1.04
DDX56-203ENST00000421223 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 OOSP1A8MZH6 123 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 CDKN1BP46527 198 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 CSN1S1P47710 185 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 SIGLEC15Q6ZMC9 328 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 FAM231DQ6ZW35 169 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 MBD6Q96DN6 1003 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 ZC2HC1AQ96GY0 325 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 CHEK1O14757 476 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 CSN3P07498 182 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 PIMREGQ9BSJ6 248 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 C7orf69Q9H7B7 122 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 RABAC1Q9UI14 185 aa8.55□□□□□ -1.04
DDX56-203ENST00000421223 IGHV4-30-2A0A087WSY4 118 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 HSBP1O75506 76 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 IGHV4-38-2P0DP08 117 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 ZANQ9Y493 2812 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 WI2-2373I1.2A0A1W2PRP0 233 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 CT45A10P0DMU9 189 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 AJUBAQ96IF1 538 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 USP24Q9UPU5 2620 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 A0A1W2PS18 150 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 IGLV2-11P01706 119 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 BATFQ16520 125 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 LCNL1Q6ZST4 164 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 ATOH7Q8N100 152 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 NRN1Q9NPD7 142 aa8.54□□□□□ -1.04
DDX56-203ENST00000421223 IGKV3-7A0A075B6H7 116 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 SCGB2A1O75556 95 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 ZNF138P52744 262 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 HBBP68871 147 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 EBI3Q14213 229 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 TEX43Q6ZNM6 134 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 SNHG12Q9BXW3 62 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 ANKRD17O75179 2603 aaKnown RBP8.53□□□□□ -1.04
DDX56-203ENST00000421223 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 OVOL3O00110 214 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 GPX1P07203 203 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 RPL7P18124 248 aaKnown RBP8.53□□□□□ -1.04
DDX56-203ENST00000421223 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
DDX56-203ENST00000421223 PSG3Q16557 428 aa8.52□□□□□ -1.05
DDX56-203ENST00000421223 COX19Q49B96 90 aa8.52□□□□□ -1.05
DDX56-203ENST00000421223 CITED1Q99966 193 aa8.52□□□□□ -1.05
DDX56-203ENST00000421223 H0Y8G0 127 aa8.52□□□□□ -1.05
DDX56-203ENST00000421223 ZNF705AQ6ZN79 300 aaPredicted RBP8.52□□□□□ -1.05
DDX56-203ENST00000421223 RBPMS2Q6ZRY4 209 aaKnown RBP8.52□□□□□ -1.05
DDX56-203ENST00000421223 CCDC168Q8NDH2 2452 aa8.52□□□□□ -1.05
DDX56-203ENST00000421223 C19orf71A6NCJ1 209 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 H3BUX3 64 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
DDX56-203ENST00000421223 ARMS2P0C7Q2 107 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 ERCC8Q13216 396 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 FAM110DQ8TAY7 271 aaPredicted RBP8.51□□□□□ -1.05
DDX56-203ENST00000421223 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 KCNS1Q96KK3 526 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 VGLL1Q99990 258 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 IGHV1-69DA0A0B4J2H0 117 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 M0R2Z0 102 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 IGHV1-69P01742 117 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 TRGV3P03979 118 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 ZNF324O75467 553 aaPredicted RBP8.51□□□□□ -1.05
DDX56-203ENST00000421223 CRIP1P50238 77 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
DDX56-203ENST00000421223 C20orf144Q9BQM9 153 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 HIF1ANQ9NWT6 349 aa8.51□□□□□ -1.05
DDX56-203ENST00000421223 SONP18583 2426 aaKnown RBP8.5□□□□□ -1.05
DDX56-203ENST00000421223 MRPS12O15235 138 aaKnown RBP8.5□□□□□ -1.05
DDX56-203ENST00000421223 C5orf56Q8N8D9 126 aa8.5□□□□□ -1.05
DDX56-203ENST00000421223 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
DDX56-203ENST00000421223 SMAD5-AS1Q9Y6J3 95 aa8.5□□□□□ -1.05
DDX56-203ENST00000421223 TRAV41A0A0B4J266 112 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms