RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF843Q8N446 348 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 TMEM70Q9BUB7 260 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 DOPEY1Q5JWR5 2465 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 RHODO00212 210 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 HLA-DRB1P01911 266 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 USF1P22415 310 aaPredicted RBP7.44□□□□□ -1.22
SNHG3-201ENST00000413987 ZNF497Q6ZNH5 498 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 COMMD5Q9GZQ3 224 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 AKAP6Q13023 2319 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 BUB3O43684 328 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 RPL18AQ02543 176 aaKnown RBP7.43□□□□□ -1.22
SNHG3-201ENST00000413987 ZNF816Q0VGE8 651 aaPredicted RBP7.43□□□□□ -1.22
SNHG3-201ENST00000413987 CENPWQ5EE01 88 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 ARPC1AQ92747 370 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 GPR82Q96P67 336 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 TMEM167BQ9NRX6 74 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 CACNA1DQ01668 2161 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 TRGV11A0A075B6L2 103 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 OR2T8A6NH00 312 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 C2orf70A6NJV1 201 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 C19orf84I3L1E1 186 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 SPRNQ5BIV9 151 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 EBLN2Q6P2I7 272 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 Q6ZR03 302 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 ZCCHC24Q8N2G6 241 aaKnown RBP7.43□□□□□ -1.22
SNHG3-201ENST00000413987 GGTLC1Q9BX51 225 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
SNHG3-201ENST00000413987 PRNDQ9UKY0 176 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 PKIGQ9Y2B9 76 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 MPC1Q9Y5U8 109 aa7.43□□□□□ -1.22
SNHG3-201ENST00000413987 SPINK4O60575 86 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CRYBB3P26998 211 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 GPR183P32249 361 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 GNG5P63218 68 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 PSG9Q00887 426 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 RTL8BQ17RB0 113 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
SNHG3-201ENST00000413987 MIC13Q5XKP0 118 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 MRPL54Q6P161 138 aaKnown RBP7.42□□□□□ -1.22
SNHG3-201ENST00000413987 Q6P435 159 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 WDR86Q86TI4 376 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 ITLN2Q8WWU7 325 aaPredicted RBP7.42□□□□□ -1.22
SNHG3-201ENST00000413987 MGST2Q99735 147 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 TMEM191AQ9H0A3 160 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 NPVFQ9HCQ7 196 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 FBN2P35556 2912 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 IGLC1P0CG04 106 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CT45A6P0DMU7 189 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CT45A5P0DMU8 189 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CT45A7P0DMV0 189 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 HIST1H1AQ02539 215 aaPredicted RBP7.42□□□□□ -1.22
SNHG3-201ENST00000413987 EIF4EBP1Q13541 118 aaPredicted RBP7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CT45A1Q5HYN5 189 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 Q8IYB0 196 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 CT45A3Q8NHU0 189 aa7.42□□□□□ -1.22
SNHG3-201ENST00000413987 HELZ2Q9BYK8 2649 aaKnown RBP7.41□□□□□ -1.22
SNHG3-201ENST00000413987 GCN1Q92616 2671 aaKnown RBP7.41□□□□□ -1.22
SNHG3-201ENST00000413987 OR7C2O60412 319 aa7.41□□□□□ -1.22
SNHG3-201ENST00000413987 RNASE6Q93091 150 aaKnown RBP7.41□□□□□ -1.22
SNHG3-201ENST00000413987 TNFRSF19Q9NS68 423 aa7.41□□□□□ -1.22
SNHG3-201ENST00000413987 HCFC1P51610 2035 aa7.41□□□□□ -1.22
SNHG3-201ENST00000413987 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 J3QT63 122 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 WNT9BO14905 357 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 APOA2P02652 100 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
SNHG3-201ENST00000413987 SEC11AP67812 179 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 MUC21Q5SSG8 566 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 ZNF826PQ6ZT77 177 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 HSD17B10Q99714 261 aaKnown RBP7.4□□□□□ -1.22
SNHG3-201ENST00000413987 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 RNASE7Q9H1E1 156 aaKnown RBP7.4□□□□□ -1.22
SNHG3-201ENST00000413987 SERTAD4Q9NUC0 356 aa7.4□□□□□ -1.22
SNHG3-201ENST00000413987 C17orf98A8MV24 154 aa7.4□□□□□ -1.23
SNHG3-201ENST00000413987 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.23
SNHG3-201ENST00000413987 CRLF1O75462 422 aa7.4□□□□□ -1.23
SNHG3-201ENST00000413987 TFF1P04155 84 aa7.4□□□□□ -1.23
SNHG3-201ENST00000413987 AZU1P20160 251 aa7.4□□□□□ -1.23
SNHG3-201ENST00000413987 TEX45Q8NA69 505 aa7.4□□□□□ -1.23
SNHG3-201ENST00000413987 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.23
SNHG3-201ENST00000413987 IQCF6A8MYZ5 107 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 SHISA9B4DS77 424 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 NDUFS7O75251 213 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 OR2H2O95918 312 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 FXYD3Q14802 87 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 AP1S3Q96PC3 154 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
SNHG3-201ENST00000413987 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
SNHG3-201ENST00000413987 J3KT08 172 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms