RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 METTL26Q96S19 204 aa10.54□□□□□ -0.72
LIMS1-205ENST00000410093 A8MWP6 167 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 TSTD3H0UI37 97 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 H3BTX0 84 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 BUB3O43684 328 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 SNRPCP09234 159 aaKnown RBP10.53□□□□□ -0.72
LIMS1-205ENST00000410093 GZMBP10144 247 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 PKIAP61925 76 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
LIMS1-205ENST00000410093 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
LIMS1-205ENST00000410093 HIF1ANQ9NWT6 349 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 S4R3C0 116 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
LIMS1-205ENST00000410093 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
LIMS1-205ENST00000410093 TMEM256Q8N2U0 113 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 C17orf77Q96MU5 243 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 MS4A10Q96PG2 267 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
LIMS1-205ENST00000410093 A0A0G2JLM5 398 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 G3V318 75 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 SPINK4O60575 86 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 BMI1P35226 326 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 GATD1Q8NB37 220 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 OR2D3Q8NGH3 330 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 BORCS7Q96B45 105 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 GNB4Q9HAV0 340 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 U3KQE9 123 aa10.52□□□□□ -0.73
LIMS1-205ENST00000410093 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
LIMS1-205ENST00000410093 VPS13CQ709C8 3753 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SERF1AO75920 110 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 IGHV3-23P01764 117 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 IGHV4-38-2P0DP08 117 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SRIP30626 198 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SLC35B1P78383 322 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 LOXL1Q08397 574 aaPredicted RBP10.51□□□□□ -0.73
LIMS1-205ENST00000410093 RIGQ13278 110 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 BRD3OSQ6XYD6 125 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 LINC00322Q6ZN03 302 aaPredicted RBP10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SIGLECL1Q8N7X8 197 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 ZC2HC1AQ96GY0 325 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 KCNS1Q96KK3 526 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SGK494Q96LW2 274 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 NOL4LQ96MY1 436 aaPredicted RBP10.51□□□□□ -0.73
LIMS1-205ENST00000410093 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 PRDM13Q9H4Q3 707 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 TP53TG3Q9ULZ0 132 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 ABCA2Q9BZC7 2435 aa10.51□□□□□ -0.73
LIMS1-205ENST00000410093 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 NDUFA4O00483 81 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
LIMS1-205ENST00000410093 TRGV3P03979 118 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 RAB4AP20338 218 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 KRTAP1-3Q8IUG1 177 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 SMAD5-AS1Q9Y6J3 95 aa10.5□□□□□ -0.73
LIMS1-205ENST00000410093 ZNF469Q96JG9 3925 aaPredicted RBP10.5□□□□□ -0.73
LIMS1-205ENST00000410093 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
LIMS1-205ENST00000410093 H3BUX3 64 aa10.49□□□□□ -0.73
LIMS1-205ENST00000410093 CHEK1O14757 476 aa10.49□□□□□ -0.73
LIMS1-205ENST00000410093 PPP1R14DQ9NXH3 145 aa10.49□□□□□ -0.73
LIMS1-205ENST00000410093 C2CD3Q4AC94 2353 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
LIMS1-205ENST00000410093 A0A1W2PS18 150 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 SH2D7A6NKC9 451 aaPredicted RBP10.48□□□□□ -0.73
LIMS1-205ENST00000410093 LINC01548A6NM66 108 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 M0R3E3 92 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 GPX1P07203 203 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 PPIFP30405 207 aaKnown RBP10.48□□□□□ -0.73
LIMS1-205ENST00000410093 SLAQ13239 276 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 LCN12Q6JVE5 192 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 TCF24Q7RTU0 167 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
LIMS1-205ENST00000410093 PRR25Q96S07 402 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 ALKBH7Q9BT30 221 aaPredicted RBP10.48□□□□□ -0.73
LIMS1-205ENST00000410093 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 CLPSL1A2RUU4 121 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 ARL3P36405 182 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 LINC00310P59036 64 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 C18orf32Q8TCD1 76 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 PGLYRP4Q96LB8 373 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
LIMS1-205ENST00000410093 A0A096LNT2 108 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 NUPR1O60356 82 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 ZNF324O75467 553 aaPredicted RBP10.47□□□□□ -0.73
LIMS1-205ENST00000410093 SCGB1D1O95968 90 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 CAMPP49913 170 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 CTAG1AP78358 180 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 C9orf152Q5JTZ5 239 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
LIMS1-205ENST00000410093 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
LIMS1-205ENST00000410093 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms