RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CSN1S1P47710 185 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 TCF24Q7RTU0 167 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-204ENST00000409727 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-204ENST00000409727 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 K7EN84 100 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 CCL24O00175 119 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-204ENST00000409727 FOLR2P14207 255 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 OR5I1Q13606 314 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 RNF212Q495C1 297 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 IGF2BP2-AS1Q96M15 143 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
CHMP3-204ENST00000409727 C9JCJ5 164 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 ZNF253O75346 499 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 TFPI2P48307 235 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 TMEM183BQ1AE95 376 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 PRNTQ86SH4 94 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 BAGE2Q86Y30 109 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 OR9G4Q8NGQ1 327 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 C2CD3Q4AC94 2353 aa9.43□□□□□ -0.9
CHMP3-204ENST00000409727 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-204ENST00000409727 BMI1P35226 326 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 TAS2R60P59551 318 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 WFDC12Q8WWY7 111 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 FMC1Q96HJ9 113 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 MLXQ9UH92 298 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 B4DEV8 164 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 PRAC2D3DTV9 90 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 K7EQM0 130 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 M0QZ24 198 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 MEOX2P50222 304 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 ADAMTSL5Q6ZMM2 481 aa9.42□□□□□ -0.9
CHMP3-204ENST00000409727 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 IGLV2-11P01706 119 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 PRR27Q6MZM9 219 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 Q86TA4 180 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
CHMP3-204ENST00000409727 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 ERCC8Q13216 396 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 FHL3Q13643 280 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 PSG3Q16557 428 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 TMEM75Q8N9X5 138 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 SFRP2Q96HF1 295 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 VGLL1Q99990 258 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
CHMP3-204ENST00000409727 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 SMCO4Q9NRQ5 59 aa9.4□□□□□ -0.9
CHMP3-204ENST00000409727 SOCS3O14543 225 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 LTAP01374 205 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.91
CHMP3-204ENST00000409727 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.91
CHMP3-204ENST00000409727 DEFB1P60022 68 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 ERVFC1-1P60608 527 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 FLI1Q01543 452 aaPredicted RBP9.4□□□□□ -0.91
CHMP3-204ENST00000409727 Q8TAT8 98 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 PSG8Q9UQ74 426 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.91
CHMP3-204ENST00000409727 JMJD1CQ15652 2540 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 A0A087WWC5 75 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 A0A1B0GUS0 222 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 S100A9P06702 114 aaKnown RBP9.39□□□□□ -0.91
CHMP3-204ENST00000409727 CSN3P07498 182 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
CHMP3-204ENST00000409727 TEP1Q99973 2627 aaKnown RBP9.39□□□□□ -0.91
CHMP3-204ENST00000409727 H7BYZ3 331 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 OVOL1O14753 267 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 FOXL1Q12952 345 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 DCANP1Q8TF63 244 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 GCGP01275 180 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 FAM24BQ8N5W8 94 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 OR10G8Q8NGN5 311 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 C8orf49Q96NF6 230 aa9.38□□□□□ -0.91
CHMP3-204ENST00000409727 WNK1Q9H4A3 2382 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 SERTM2A0A1B0GWG4 89 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 F6UB75 175 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 ZNF688P0C7X2 276 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
CHMP3-204ENST00000409727 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
CHMP3-204ENST00000409727 NIPBLQ6KC79 2804 aaeCLIP9.37□□□□□ -0.91
CHMP3-204ENST00000409727 ID1P41134 155 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 IBA57Q5T440 356 aaKnown RBP9.36□□□□□ -0.91
CHMP3-204ENST00000409727 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 ZC2HC1AQ96GY0 325 aa9.36□□□□□ -0.91
CHMP3-204ENST00000409727 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms