RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ZNF580Q9UK33 172 aa18.99■□□□□ 0.63
DNMT3A-206ENST00000406659 FBLL1A6NHQ2 334 aaKnown RBP18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 TRBV12-3P01733 135 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 AMBPP02760 352 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 CYB5R2Q6BCY4 276 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 C9orf139Q6ZV77 190 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 OR2D3Q8NGH3 330 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 GFRA4Q9GZZ7 299 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 NIT2Q9NQR4 276 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 GRIFINA4D1Z8 144 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 NDUFA4O00483 81 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 HLA-DMBP28068 263 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 CFHR3Q02985 330 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 ATP5L2Q7Z4Y8 100 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 OR4X2Q8NGF9 303 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 SLC50A1Q9BRV3 221 aa18.98■□□□□ 0.63
DNMT3A-206ENST00000406659 NAV2Q8IVL1 2488 aa18.97■□□□□ 0.63
DNMT3A-206ENST00000406659 APCSP02743 223 aa18.97■□□□□ 0.63
DNMT3A-206ENST00000406659 CT45A10P0DMU9 189 aa18.97■□□□□ 0.63
DNMT3A-206ENST00000406659 LCN12Q6JVE5 192 aa18.97■□□□□ 0.63
DNMT3A-206ENST00000406659 FAM231BA6NCW3 169 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 J3QKU1 62 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 IGHG4P01861 327 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 PLA2G2AP14555 144 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 C8orf49Q96NF6 230 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 ABCA12Q86UK0 2595 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 ZNF705FA8MVS1 300 aaPredicted RBP18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 PYY3Q5JQD4 70 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 SAPCD1Q5SSQ6 148 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 C16orf54Q6UWD8 224 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 Q6YL49 198 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 RBPMS2Q6ZRY4 209 aaKnown RBP18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 LCNL1Q6ZST4 164 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 TMEM256Q8N2U0 113 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 GTSF1Q8WW33 167 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 TMEM18Q96B42 140 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 PGLYRP4Q96LB8 373 aa18.96■□□□□ 0.63
DNMT3A-206ENST00000406659 A0A1B0GUS0 222 aa18.95■□□□□ 0.62
DNMT3A-206ENST00000406659 TMEM95Q3KNT9 176 aa18.95■□□□□ 0.62
DNMT3A-206ENST00000406659 KIAA1644Q3SXP7 199 aa18.95■□□□□ 0.62
DNMT3A-206ENST00000406659 KRTAP1-3Q8IUG1 177 aa18.95■□□□□ 0.62
DNMT3A-206ENST00000406659 VPREB3Q9UKI3 123 aa18.95■□□□□ 0.62
DNMT3A-206ENST00000406659 CRIP1P50238 77 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 VGLL1Q99990 258 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 CAMPP49913 170 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 Q0VG73 95 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 UNQ9165/PRO28630Q6UXU0 137 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 BAGE3Q86Y29 109 aa18.93■□□□□ 0.62
DNMT3A-206ENST00000406659 A0A1B0GXF2 115 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 GZMBP10144 247 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 HBBP68871 147 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 GDF5OSQ5U4N7 250 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 RNF182Q8N6D2 247 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 PRR25Q96S07 402 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 CSMD2Q7Z408 3487 aa18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 KMT2BQ9UMN6 2715 aaPredicted RBP18.92■□□□□ 0.62
DNMT3A-206ENST00000406659 FAM209BQ5JX69 171 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 ZFHX3Q15911 3703 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 PRRC2AP48634 2157 aaKnown RBP18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 HIST2H2BCQ6DN03 193 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 C8orf86Q6ZUL3 223 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 GLMPQ8WWB7 406 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 NPFFR1Q9GZQ6 430 aa18.91■□□□□ 0.62
DNMT3A-206ENST00000406659 NUPR1O60356 82 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 SLAQ13239 276 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 FAM162BQ5T6X4 162 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 COX8CQ7Z4L0 72 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 NDFIP1Q9BT67 221 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 TP53TG3Q9ULZ0 132 aa18.9■□□□□ 0.62
DNMT3A-206ENST00000406659 TMEM89A2RUT3 159 aa18.89■□□□□ 0.61
DNMT3A-206ENST00000406659 SRIP30626 198 aa18.89■□□□□ 0.61
DNMT3A-206ENST00000406659 Q8TAT8 98 aa18.89■□□□□ 0.61
DNMT3A-206ENST00000406659 RBAKDNA6NC62 111 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 PRAC2D3DTV9 90 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 PSMB8P28062 276 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 OR10J3Q5JRS4 329 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 MRPL53Q96EL3 112 aaKnown RBP18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 PSMG3-AS1Q96PY0 264 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 PEF1Q9UBV8 284 aaKnown RBP18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 TRAV8-2A0A0B4J237 113 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 A0A1W2PS18 150 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 SMAD7O15105 426 aaKnown RBP18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 HOXA3O43365 443 aaPredicted RBP18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 SH2D1AO60880 128 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 SERF1AO75920 110 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 FOXA3P55318 350 aaPredicted RBP18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 ERCC8Q13216 396 aa18.88■□□□□ 0.61
DNMT3A-206ENST00000406659 C16orf92Q96LL3 132 aa18.87■□□□□ 0.61
DNMT3A-206ENST00000406659 SSBP4Q9BWG4 385 aaPredicted RBP18.87■□□□□ 0.61
DNMT3A-206ENST00000406659 CLEC5AQ9NY25 188 aa18.87■□□□□ 0.61
DNMT3A-206ENST00000406659 CHD6Q8TD26 2715 aa18.87■□□□□ 0.61
DNMT3A-206ENST00000406659 TMEM189A5PLL7 270 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 PRDM13Q9H4Q3 707 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 APCP25054 2843 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 ZANQ9Y493 2812 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 A8MWP6 167 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 F2Z2F3 143 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 ESDP10768 282 aa18.86■□□□□ 0.61
DNMT3A-206ENST00000406659 BMI1P35226 326 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms