RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 APCP25054 2843 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 TRBV7-1A0A0A6YYK4 115 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 IGHV4-59P01825 116 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 APCSP02743 223 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 PDE6HQ13956 83 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 TMEM18Q96B42 140 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 RCHY1Q96PM5 261 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 PRDM13Q9H4Q3 707 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 CHD6Q8TD26 2715 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 CHEK1O14757 476 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 IGHG2P01859 326 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 PPIFP30405 207 aaKnown RBP11.61□□□□□ -0.55
GPC3-202ENST00000394299 TENM4Q6N022 2769 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 A8MWL6 223 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 K7EQM0 130 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 IGF1P05019 195 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
GPC3-202ENST00000394299 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 HLA-DQA1P01909 254 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 MT-ND6P03923 174 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 PSG9Q00887 426 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
GPC3-202ENST00000394299 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 DOPEY2Q9Y3R5 2298 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 PF4V1P10720 104 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 CSN1S1P47710 185 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 CRIP2P52943 208 aaPredicted RBP11.6□□□□□ -0.55
GPC3-202ENST00000394299 ERCC8Q13216 396 aa11.6□□□□□ -0.55
GPC3-202ENST00000394299 TMSB15BA0A087X1C1 80 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 A0A1B0GXF2 115 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 ZNF253O75346 499 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 C10orf99Q6UWK7 81 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 ARL3P36405 182 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 RELQ04864 619 aaPredicted RBP11.59□□□□□ -0.55
GPC3-202ENST00000394299 Q0VG73 95 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 WIPF2Q8TF74 440 aaPredicted RBP11.59□□□□□ -0.55
GPC3-202ENST00000394299 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
GPC3-202ENST00000394299 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 ZNF80P51504 273 aaPredicted RBP11.57□□□□□ -0.56
GPC3-202ENST00000394299 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 METTL26Q96S19 204 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 TPPP3Q9BW30 176 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 PRRC2AP48634 2157 aaKnown RBP11.57□□□□□ -0.56
GPC3-202ENST00000394299 COX19Q49B96 90 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 CT83Q5H943 113 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
GPC3-202ENST00000394299 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
GPC3-202ENST00000394299 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
GPC3-202ENST00000394299 GATA3P23771 443 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 MUC21Q5SSG8 566 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 Q6ZWC4 215 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 PRR25Q96S07 402 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
GPC3-202ENST00000394299 HBBP68871 147 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
GPC3-202ENST00000394299 TRAV8-2A0A0B4J237 113 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 DEFB113Q30KQ7 82 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 Q5PR19 223 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 RASL11AQ6T310 242 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 U3KQE9 123 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 A0A1W2PS18 150 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 SH2D1AO60880 128 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 SAMD10Q9BYL1 202 aa11.55□□□□□ -0.56
GPC3-202ENST00000394299 A8MWP6 167 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 SCGB1D1O95968 90 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 ESDP10768 282 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 EDN2P20800 178 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 RAB9AP51151 201 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 ATP5L2Q7Z4Y8 100 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
GPC3-202ENST00000394299 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 CR1P17927 2039 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 M0QZ24 198 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 M0QZK8 103 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
GPC3-202ENST00000394299 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
GPC3-202ENST00000394299 CT45A10P0DMU9 189 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 PMCHP20382 165 aa11.54□□□□□ -0.56
GPC3-202ENST00000394299 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms