RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 IGLV2-11P01706 119 aa15.39■□□□□ 0.05
HDDC3-202ENST00000394272 RNF212Q495C1 297 aa15.39■□□□□ 0.05
HDDC3-202ENST00000394272 FMC1Q96HJ9 113 aa15.39■□□□□ 0.05
HDDC3-202ENST00000394272 CBLN1P23435 193 aa15.38■□□□□ 0.05
HDDC3-202ENST00000394272 UBE2G1P62253 170 aa15.38■□□□□ 0.05
HDDC3-202ENST00000394272 SGK494Q96LW2 274 aa15.38■□□□□ 0.05
HDDC3-202ENST00000394272 A0A1W2PRX2 142 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 SOCS3O14543 225 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 CSN1S1P47710 185 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 TMEM75Q8N9X5 138 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 NRN1Q9NPD7 142 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 SMCO4Q9NRQ5 59 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 TRAV8-1A0A0A6YYK1 113 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 A0A1B0GUS0 222 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 TCF24Q7RTU0 167 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 BAGE2Q86Y30 109 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 DLX4Q92988 240 aaPredicted RBP15.37■□□□□ 0.05
HDDC3-202ENST00000394272 TMEM242Q9NWH2 141 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 PRELID1Q9Y255 219 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 JMJD1CQ15652 2540 aa15.37■□□□□ 0.05
HDDC3-202ENST00000394272 TRBV6-1A0A0K0K1D8 114 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 SERTM2A0A1B0GWG4 89 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 ADARB2-AS1A8MUL3 147 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 KRTAP10-3P60369 221 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 LCN12Q6JVE5 192 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 ADAMTSL5Q6ZMM2 481 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 RNF182Q8N6D2 247 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 OR9G4Q8NGQ1 327 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 MRPL53Q96EL3 112 aaKnown RBP15.36■□□□□ 0.05
HDDC3-202ENST00000394272 TUBA4BQ9H853 241 aa15.36■□□□□ 0.05
HDDC3-202ENST00000394272 K7EQM0 130 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 CCL24O00175 119 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 LTAP01374 205 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 MT-ND4LP03901 98 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 PRB4P10163 310 aaPredicted RBP15.35■□□□□ 0.05
HDDC3-202ENST00000394272 FOLR2P14207 255 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 SMIM12Q96EX1 92 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 C16orf92Q96LL3 132 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 CTDSP1Q9GZU7 261 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 CLEC5AQ9NY25 188 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 PEMTQ9UBM1 199 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 WNK1Q9H4A3 2382 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 TEP1Q99973 2627 aaKnown RBP15.35■□□□□ 0.05
HDDC3-202ENST00000394272 ZNF705FA8MVS1 300 aaPredicted RBP15.35■□□□□ 0.05
HDDC3-202ENST00000394272 GCGP01275 180 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 RPL11P62913 178 aaKnown RBP15.35■□□□□ 0.05
HDDC3-202ENST00000394272 PSG3Q16557 428 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 Q86TA4 180 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 MLST8Q9BVC4 326 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 SELENOKQ9Y6D0 94 aa15.35■□□□□ 0.05
HDDC3-202ENST00000394272 NHLRC2Q8NBF2 726 aa15.34■□□□□ 0.05
HDDC3-202ENST00000394272 ANAPC16Q96DE5 110 aa15.34■□□□□ 0.05
HDDC3-202ENST00000394272 SFRP2Q96HF1 295 aa15.34■□□□□ 0.05
HDDC3-202ENST00000394272 MLXQ9UH92 298 aa15.34■□□□□ 0.05
HDDC3-202ENST00000394272 FLI1Q01543 452 aaPredicted RBP15.33■□□□□ 0.05
HDDC3-202ENST00000394272 OR5I1Q13606 314 aa15.33■□□□□ 0.05
HDDC3-202ENST00000394272 IGKV2-40A0A087WW87 121 aaPredicted RBP15.33■□□□□ 0.04
HDDC3-202ENST00000394272 PRAC2D3DTV9 90 aa15.33■□□□□ 0.04
HDDC3-202ENST00000394272 IGKV2D-40P01614 121 aaPredicted RBP15.33■□□□□ 0.04
HDDC3-202ENST00000394272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.33■□□□□ 0.04
HDDC3-202ENST00000394272 PSG8Q9UQ74 426 aa15.33■□□□□ 0.04
HDDC3-202ENST00000394272 IGKV3-7A0A075B6H7 116 aa15.32■□□□□ 0.04
HDDC3-202ENST00000394272 CXorf65A6NEN9 183 aa15.32■□□□□ 0.04
HDDC3-202ENST00000394272 PRNTQ86SH4 94 aa15.32■□□□□ 0.04
HDDC3-202ENST00000394272 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.32■□□□□ 0.04
HDDC3-202ENST00000394272 DCANP1Q8TF63 244 aa15.32■□□□□ 0.04
HDDC3-202ENST00000394272 C20orf173Q96LM9 149 aa15.32■□□□□ 0.04
HDDC3-202ENST00000394272 M0QZ24 198 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 CSN3P07498 182 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 MGST1P10620 155 aaKnown RBP15.31■□□□□ 0.04
HDDC3-202ENST00000394272 FOXL1Q12952 345 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 H7BYZ3 331 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 SAMD13Q5VXD3 122 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 TMEM183AQ8IXX5 376 aa15.31■□□□□ 0.04
HDDC3-202ENST00000394272 RBAKDNA6NC62 111 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 FBLL1A6NHQ2 334 aaKnown RBP15.3■□□□□ 0.04
HDDC3-202ENST00000394272 PPP1R2P9O14990 202 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 NDUFA11Q86Y39 141 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 YPEL4Q96NS1 127 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 VGLL1Q99990 258 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 MS4A6AQ9H2W1 248 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 ZFP30Q9Y2G7 519 aa15.3■□□□□ 0.04
HDDC3-202ENST00000394272 OR10G8Q8NGN5 311 aa15.29■□□□□ 0.04
HDDC3-202ENST00000394272 ERVFC1-1P60608 527 aa15.29■□□□□ 0.04
HDDC3-202ENST00000394272 GBGT1Q8N5D6 347 aa15.29■□□□□ 0.04
HDDC3-202ENST00000394272 RNASE7Q9H1E1 156 aaKnown RBP15.29■□□□□ 0.04
HDDC3-202ENST00000394272 OSTCQ9NRP0 149 aa15.29■□□□□ 0.04
HDDC3-202ENST00000394272 COLCA2A8K830 154 aa15.28■□□□□ 0.04
HDDC3-202ENST00000394272 NSUN5P1Q3KNT7 163 aa15.28■□□□□ 0.04
HDDC3-202ENST00000394272 C15orf54Q8N8G6 183 aa15.28■□□□□ 0.04
HDDC3-202ENST00000394272 TMA7Q9Y2S6 64 aaKnown RBP15.28■□□□□ 0.04
HDDC3-202ENST00000394272 MAST4O15021 2626 aa15.28■□□□□ 0.04
HDDC3-202ENST00000394272 FAM231DQ6ZW35 169 aa15.27■□□□□ 0.04
HDDC3-202ENST00000394272 ASCL2Q99929 193 aa15.27■□□□□ 0.04
HDDC3-202ENST00000394272 OVOL1O14753 267 aa15.27■□□□□ 0.03
HDDC3-202ENST00000394272 ELOBQ15370 118 aa15.27■□□□□ 0.03
HDDC3-202ENST00000394272 IBA57Q5T440 356 aaKnown RBP15.27■□□□□ 0.03
HDDC3-202ENST00000394272 FAM24BQ8N5W8 94 aa15.27■□□□□ 0.03
HDDC3-202ENST00000394272 ZNF738Q8NE65 137 aa15.27■□□□□ 0.03
HDDC3-202ENST00000394272 URGCP-MRPS24S4R325 110 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms