RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
SCFD2-201ENST00000388940 KLHDC1Q8N7A1 406 aa11.65□□□□□ -0.54
SCFD2-201ENST00000388940 CSTL1Q9H114 145 aa11.65□□□□□ -0.54
SCFD2-201ENST00000388940 NBASA2RRP1 2371 aa11.65□□□□□ -0.54
SCFD2-201ENST00000388940 TMEM238C9JI98 176 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
SCFD2-201ENST00000388940 ARMS2P0C7Q2 107 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 TFPI2P48307 235 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 C8orf49Q96NF6 230 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 ATRXP46100 2492 aa11.64□□□□□ -0.55
SCFD2-201ENST00000388940 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 SAA4P35542 130 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 RPS20P60866 119 aaKnown RBP11.63□□□□□ -0.55
SCFD2-201ENST00000388940 PRR31Q5SQ13 230 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 UNQ5815/PRO19632Q6UWF5 114 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 TMEM70Q9BUB7 260 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 HIVEP3Q5T1R4 2406 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 TRAV9-2A0A087WT02 112 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 RAB9AP51151 201 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 RNF151Q2KHN1 245 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 ASCL2Q99929 193 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
SCFD2-201ENST00000388940 CENPVL3A0A0U1RRI6 287 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 TMEM189A5PLL7 270 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 CBY3A6NI87 242 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 C15orf32Q32M92 178 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 PRR25Q96S07 402 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 VPS25Q9BRG1 176 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
SCFD2-201ENST00000388940 A0A087X0K7 114 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 M0QZ24 198 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 NPFFO15130 113 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 SH2D1AO60880 128 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 IGHG4P01861 327 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
SCFD2-201ENST00000388940 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-201ENST00000388940 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-201ENST00000388940 RHOGP84095 191 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
SCFD2-201ENST00000388940 ECSCRQ19T08 205 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 C19orf84I3L1E1 186 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 BMI1P35226 326 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 SPTBN1Q01082 2364 aaKnown RBP11.6□□□□□ -0.55
SCFD2-201ENST00000388940 SPTBN4Q9H254 2564 aa11.6□□□□□ -0.55
SCFD2-201ENST00000388940 RELNP78509 3460 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 SYS1-DBNDD2H3BUS1 97 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 BUB3O43684 328 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 GOSR1O95249 250 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 CLEC3BP05452 202 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 GPR183P32249 361 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 COX11Q9Y6N1 276 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
SCFD2-201ENST00000388940 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
SCFD2-201ENST00000388940 UQCRFS1P47985 274 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 Q6ZN92 141 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 STPG4Q8N801 248 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 C5orf56Q8N8D9 126 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 OR4C5Q8NGB2 326 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 ATP6V0BQ99437 205 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 U3KQK5 164 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
SCFD2-201ENST00000388940 PAX8Q06710 450 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 CCDC140Q96MF4 163 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 VGLL1Q99990 258 aa11.58□□□□□ -0.56
SCFD2-201ENST00000388940 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
SCFD2-201ENST00000388940 IGLL1P15814 213 aa11.57□□□□□ -0.56
SCFD2-201ENST00000388940 GNLYP22749 145 aa11.57□□□□□ -0.56
SCFD2-201ENST00000388940 PET117Q6UWS5 81 aa11.57□□□□□ -0.56
SCFD2-201ENST00000388940 HSPB8Q9UJY1 196 aa11.57□□□□□ -0.56
SCFD2-201ENST00000388940 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 OR4C46A6NHA9 309 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 LINC01548A6NM66 108 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 ZNF138P52744 262 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 LINC00173Q6ZV60 143 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 SLC50A1Q9BRV3 221 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 TPPP3Q9BW30 176 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 LAMTOR2Q9Y2Q5 125 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 G3V318 75 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
SCFD2-201ENST00000388940 CRIP2P52943 208 aaPredicted RBP11.56□□□□□ -0.56
SCFD2-201ENST00000388940 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms