RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 EVI2AP22794 236 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 TWIST1Q15672 202 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 TMEM8BA6NDV4 472 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 TM4SF5O14894 197 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 MT-ATP8P03928 68 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 FCER1GP30273 86 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
CTNS-202ENST00000381870 SIGLEC15Q6ZMC9 328 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 TTC9CQ8N5M4 171 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
CTNS-202ENST00000381870 INTS1Q8N201 2190 aaKnown RBP11.8□□□□□ -0.52
CTNS-202ENST00000381870 VSTM5A8MXK1 200 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 SH2D1AO60880 128 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 TMEM178AQ8NBL3 297 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 ZNF418Q8TF45 676 aaPredicted RBP11.79□□□□□ -0.52
CTNS-202ENST00000381870 NGBQ9NPG2 151 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 TMEM160Q9NX00 188 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 SRSF1Q07955 248 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNS-202ENST00000381870 FOXI1Q12951 378 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 FHL3Q13643 280 aa11.79□□□□□ -0.52
CTNS-202ENST00000381870 IGHV3-72A0A0B4J1Y9 119 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 TRAV40A0A0B4J280 105 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 DPM2O94777 84 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 PMS2CLQ68D20 193 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 MSRB1Q9NZV6 116 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 EP300Q09472 2414 aaPredicted RBP11.78□□□□□ -0.52
CTNS-202ENST00000381870 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
CTNS-202ENST00000381870 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
CTNS-202ENST00000381870 RBP4P02753 201 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 C1orf162Q8NEQ5 155 aaPredicted RBP11.77□□□□□ -0.53
CTNS-202ENST00000381870 GLMPQ8WWB7 406 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 TSPAN13O95857 204 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.53
CTNS-202ENST00000381870 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 NFE4Q86UQ8 179 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 RNF183Q96D59 192 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 CYSLTR1Q9Y271 337 aa11.77□□□□□ -0.53
CTNS-202ENST00000381870 CNTFRP26992 372 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 XGP55808 180 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 TMEM30BQ3MIR4 351 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 C1QTNF4Q9BXJ3 329 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 SPRY4Q9C004 299 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
CTNS-202ENST00000381870 EGR2P11161 476 aaPredicted RBP11.76□□□□□ -0.53
CTNS-202ENST00000381870 GATA1P15976 413 aaPredicted RBP11.76□□□□□ -0.53
CTNS-202ENST00000381870 DKK4Q9UBT3 224 aa11.76□□□□□ -0.53
CTNS-202ENST00000381870 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
CTNS-202ENST00000381870 SCNM1Q9BWG6 230 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 SS18L2Q9UHA2 77 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 ZFHX2Q9C0A1 2572 aaPredicted RBP11.75□□□□□ -0.53
CTNS-202ENST00000381870 M0R1B8 84 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 TNFAIP6P98066 277 aaPredicted RBP11.75□□□□□ -0.53
CTNS-202ENST00000381870 KLRD1Q13241 179 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 TAL2Q16559 108 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 RASL11BQ9BPW5 248 aa11.75□□□□□ -0.53
CTNS-202ENST00000381870 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 MORN3Q6PF18 240 aaPredicted RBP11.74□□□□□ -0.53
CTNS-202ENST00000381870 Q6ZUT4 128 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 SHANK2-AS3Q9BTD1 123 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 FCN3O75636 299 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 TNFRSF6BO95407 300 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 IGKV1-17P01599 117 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 GATA4P43694 442 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 C5orf64Q2M2E5 130 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 TMEM200BQ69YZ2 307 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 HLA-DRB4X5D2U9 266 aa11.74□□□□□ -0.53
CTNS-202ENST00000381870 IGHV1-46P01743 117 aa11.73□□□□□ -0.53
CTNS-202ENST00000381870 ARRDC1-AS1Q9H2J1 176 aa11.73□□□□□ -0.53
CTNS-202ENST00000381870 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
CTNS-202ENST00000381870 H3BRN7 92 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 K7EM74 188 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 ATP5LO75964 103 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
CTNS-202ENST00000381870 THBDP07204 575 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 ZNF80P51504 273 aaPredicted RBP11.72□□□□□ -0.53
CTNS-202ENST00000381870 SRSF6Q13247 344 aaKnown RBP11.72□□□□□ -0.53
CTNS-202ENST00000381870 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 ZNF575Q86XF7 245 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 ERG28Q9UKR5 140 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 A0A1W2PNU3 283 aaPredicted RBP11.72□□□□□ -0.53
CTNS-202ENST00000381870 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 PTH2Q96A98 100 aa11.72□□□□□ -0.53
CTNS-202ENST00000381870 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms