RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 ZNF833PQ6ZTB9 187 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 CFHR2P36980 270 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 RSPO1Q2MKA7 263 aaPredicted RBP14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 ERG28Q9UKR5 140 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 ARMS2P0C7Q2 107 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 Q5PR19 223 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 C1orf159Q96HA4 380 aa14.32□□□□□ -0.12
CNTNAP3-204ENST00000377656 C9JQL5 133 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 C3orf79P0CE67 100 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 LIME1Q9H400 295 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 FAM215AQ9Y5M1 114 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 IGLV3-9A0A075B6K5 115 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 ERCC8Q13216 396 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 TMEM158Q8WZ71 300 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 MEGF9Q9H1U4 602 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 IGHV2-70DA0A0C4DH43 119 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 DUX4L9Q6RFH8 374 aaPredicted RBP14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 M0R2P5 195 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 S100A7L2Q5SY68 101 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 LINC00311Q8N616 119 aa14.31□□□□□ -0.12
CNTNAP3-204ENST00000377656 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 GGTLC3B5MD39 225 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 G3V318 75 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 GUSBP1Q15486 140 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 TEX36Q5VZQ5 186 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 MAPK1IP1LQ8NDC0 245 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 A0A087WWL8 130 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 DEFB121Q5J5C9 76 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 GFRA4Q9GZZ7 299 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 JPT2Q9H910 190 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 C1orf194Q5T5A4 169 aa14.3□□□□□ -0.12
CNTNAP3-204ENST00000377656 PYY3Q5JQD4 70 aa14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 RASL10AQ92737 203 aa14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 PAX9P55771 341 aa14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 SMKR1H3BMG3 65 aa14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 BCL6BQ8N143 479 aaPredicted RBP14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 SYS1-DBNDD2H3BUS1 97 aa14.29□□□□□ -0.12
CNTNAP3-204ENST00000377656 A8MWV9 139 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 PAX4O43316 350 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 ZC2HC1BQ5TFG8 222 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 SAMD5Q5TGI4 173 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 IL17RELQ6ZVW7 336 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 UBE2DNLQ8IWF7 75 aa14.28□□□□□ -0.12
CNTNAP3-204ENST00000377656 A0A1B0GV72 72 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 IGKV1-39P01597 117 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 IGKV1D-39P04432 117 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 TDGF1P3P51864 188 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 SPOCK3Q9BQ16 436 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.12
CNTNAP3-204ENST00000377656 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
CNTNAP3-204ENST00000377656 PIP4P1Q86T03 277 aa14.27□□□□□ -0.13
CNTNAP3-204ENST00000377656 DEFB130BP0DP73 79 aa14.27□□□□□ -0.13
CNTNAP3-204ENST00000377656 DEFB130AP0DP74 79 aa14.27□□□□□ -0.13
CNTNAP3-204ENST00000377656 C6orf226Q5I0X4 101 aa14.27□□□□□ -0.13
CNTNAP3-204ENST00000377656 C3orf56Q8N813 242 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 TMEM75Q8N9X5 138 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 CST9LQ9H4G1 147 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 TRBV19A0A075B6N1 114 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 ATXN8Q156A1 80 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 C11orf68Q9H3H3 251 aaKnown RBP14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 NOTCH4Q99466 2003 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 FAM231BA6NCW3 169 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 C15orf65H3BRN8 121 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 FRMPD3Q5JV73 1810 aa14.26□□□□□ -0.13
CNTNAP3-204ENST00000377656 WT1-ASQ06250 92 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 NBL1P41271 181 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 PLXND1Q9Y4D7 1925 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 TRAV13-1A0A0B4J241 112 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 CR1LQ2VPA4 569 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 PHLDA1Q8WV24 401 aaPredicted RBP14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 TNFRSF6BO95407 300 aa14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 PFN1P07737 140 aaKnown RBP14.25□□□□□ -0.13
CNTNAP3-204ENST00000377656 DKK1O94907 266 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 GAGE13Q4V321 117 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 LY6G5BQ8NDX9 201 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 Q96MF0 132 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 CUL9Q8IWT3 2517 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 PLCE1Q9P212 2302 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 MMP23AO75900 390 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 XCL2Q9UBD3 114 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 NPC2P61916 151 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 SLX1AQ9BQ83 275 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 RHODO00212 210 aa14.24□□□□□ -0.13
CNTNAP3-204ENST00000377656 LINC01619G3V211 115 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 ZNF134P52741 427 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 CT83Q5H943 113 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 MED13Q9UHV7 2174 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 SPINK13Q1W4C9 94 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 KAAG1Q9UBP8 84 aa14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 TRPT1Q86TN4 253 aaKnown RBP14.23□□□□□ -0.13
CNTNAP3-204ENST00000377656 IGLV3-1P01715 115 aa14.22□□□□□ -0.13
CNTNAP3-204ENST00000377656 WIPF3A6NGB9 483 aa14.22□□□□□ -0.13
CNTNAP3-204ENST00000377656 TMEM213A2RRL7 107 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms