RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RNF182Q8N6D2 247 aa11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 NHLRC2Q8NBF2 726 aa11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
NIPAL3-204ENST00000374399 ADARB2-AS1A8MUL3 147 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 GCGP01275 180 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 LTAP01374 205 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 RAX2Q96IS3 184 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 AAMDCQ9H7C9 122 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 TMEM242Q9NWH2 141 aa11.88□□□□□ -0.51
NIPAL3-204ENST00000374399 C2orf70A6NJV1 201 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 COLCA2A8K830 154 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 FHL3Q13643 280 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 GRAMD2BQ96HH9 432 aa11.87□□□□□ -0.51
NIPAL3-204ENST00000374399 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 MEOX2P50222 304 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 Q86TA4 180 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 BAGE2Q86Y30 109 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 DLX4Q92988 240 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 C20orf173Q96LM9 149 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 ASCL2Q99929 193 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 CTDSP1Q9GZU7 261 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 IGKV2-40A0A087WW87 121 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 IGKV2D-40P01614 121 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 CBLN1P23435 193 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 UBE2G1P62253 170 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 SFRP2Q96HF1 295 aa11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 TSSC4Q9Y5U2 329 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-204ENST00000374399 TEP1Q99973 2627 aaKnown RBP11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 MT-ND4LP03901 98 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 PSG3Q16557 428 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 NRN1Q9NPD7 142 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 MLXQ9UH92 298 aa11.85□□□□□ -0.51
NIPAL3-204ENST00000374399 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 FOLR2P14207 255 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 FLI1Q01543 452 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 ELOBQ15370 118 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 LINC00322Q6ZN03 302 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 DCANP1Q8TF63 244 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 VGLL1Q99990 258 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 PSG8Q9UQ74 426 aa11.84□□□□□ -0.51
NIPAL3-204ENST00000374399 PRNTQ86SH4 94 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 FAM24BQ8N5W8 94 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 DPF1Q92782 380 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 H7BYZ3 331 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 CSN3P07498 182 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 CSN1S1P47710 185 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 FOXL1Q12952 345 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 SMIM12Q96EX1 92 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 V9GYV3 84 aa11.83□□□□□ -0.52
NIPAL3-204ENST00000374399 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 TENM1Q9UKZ4 2725 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 JMJD1CQ15652 2540 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 IGKV3-7A0A075B6H7 116 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 SERTM2A0A1B0GWG4 89 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 CCL24O00175 119 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 CXCL1P09341 107 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 MGST1P10620 155 aaKnown RBP11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 OR10G8Q8NGN5 311 aa11.82□□□□□ -0.52
NIPAL3-204ENST00000374399 RPL11P62913 178 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-204ENST00000374399 ERCC8Q13216 396 aa11.81□□□□□ -0.52
NIPAL3-204ENST00000374399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
NIPAL3-204ENST00000374399 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
NIPAL3-204ENST00000374399 K7EQM0 130 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 DEFB1P60022 68 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 FAM231DQ6ZW35 169 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 GBGT1Q8N5D6 347 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 ZC2HC1AQ96GY0 325 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 C8orf49Q96NF6 230 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 MS4A6AQ9H2W1 248 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 TGIF2-C20orf24A0A0A6YYL0 155 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 C19orf71A6NCJ1 209 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 PPP1R2P9O14990 202 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 CRIP1P50238 77 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 COX8CQ7Z4L0 72 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 Q8TAT8 98 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 GPR61Q9BZJ8 451 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms