RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SH2D1AO60880 128 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 BTF3P20290 206 aaKnown RBP22.44■■□□□ 1.18
SSBP3-204ENST00000371320 CTRLP40313 264 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 LCN12Q6JVE5 192 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 CLEC19AQ6UXS0 136 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 CCDC140Q96MF4 163 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 PRR25Q96S07 402 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 PIMREGQ9BSJ6 248 aa22.44■■□□□ 1.18
SSBP3-204ENST00000371320 TMEM189A5PLL7 270 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 RAB9AP51151 201 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 TMEM219Q86XT9 240 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 EEF1AKMT3Q96AZ1 226 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 IGHG4P01861 327 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 COX8CQ7Z4L0 72 aa22.43■■□□□ 1.18
SSBP3-204ENST00000371320 LINC00614P0C842 121 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 HLA-DMBP28068 263 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 PMCHL1Q16048 86 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 GATD1Q8NB37 220 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 VGLL1Q99990 258 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 PKD1L2Q7Z442 2459 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 TMSB15BA0A087X1C1 80 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 C2orf70A6NJV1 201 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 BUB3O43684 328 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 CCL19Q99731 98 aa22.42■■□□□ 1.18
SSBP3-204ENST00000371320 IGHV1-69DA0A0B4J2H0 117 aa22.41■■□□□ 1.18
SSBP3-204ENST00000371320 IGHV1-69P01742 117 aa22.41■■□□□ 1.18
SSBP3-204ENST00000371320 MOB4Q9Y3A3 225 aa22.41■■□□□ 1.18
SSBP3-204ENST00000371320 TRBV7-1A0A0A6YYK4 115 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 IGHV4-61A0A0C4DH41 118 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 Q8TAT8 98 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 CLEC5AQ9NY25 188 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 IGHV1-24A0A0C4DH33 117 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 ATOH7Q8N100 152 aa22.4■■□□□ 1.18
SSBP3-204ENST00000371320 MRPL52Q86TS9 123 aaKnown RBP22.39■■□□□ 1.17
SSBP3-204ENST00000371320 A0A087X0K7 114 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 RNF224P0DH78 156 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 LYZL1Q6UWQ5 148 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 CLPSL1A2RUU4 121 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 TMEM8BA6NDV4 472 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 BRD3OSQ6XYD6 125 aa22.38■■□□□ 1.17
SSBP3-204ENST00000371320 CACNA1BQ00975 2339 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 IGHV3-66A0A0C4DH42 116 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 M0QZK8 103 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 ATP5G2Q06055 141 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 C10orf105Q8TEF2 133 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 TMEM70Q9BUB7 260 aa22.37■■□□□ 1.17
SSBP3-204ENST00000371320 TRAV41A0A0B4J266 112 aa22.36■■□□□ 1.17
SSBP3-204ENST00000371320 TRAV40A0A0B4J280 105 aa22.36■■□□□ 1.17
SSBP3-204ENST00000371320 BMI1P35226 326 aa22.36■■□□□ 1.17
SSBP3-204ENST00000371320 ZNF138P52744 262 aa22.36■■□□□ 1.17
SSBP3-204ENST00000371320 NUTF2P61970 127 aaKnown RBP22.36■■□□□ 1.17
SSBP3-204ENST00000371320 PIFOQ8TCI5 191 aa22.36■■□□□ 1.17
SSBP3-204ENST00000371320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.35■■□□□ 1.17
SSBP3-204ENST00000371320 LEPROTL1O95214 131 aa22.35■■□□□ 1.17
SSBP3-204ENST00000371320 DMRTA1Q5VZB9 504 aa22.35■■□□□ 1.17
SSBP3-204ENST00000371320 ZNF493Q6ZR52 646 aa22.35■■□□□ 1.17
SSBP3-204ENST00000371320 CSN3P07498 182 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 ZNF80P51504 273 aaPredicted RBP22.34■■□□□ 1.17
SSBP3-204ENST00000371320 KLHDC1Q8N7A1 406 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 UQCR10Q9UDW1 63 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 SPTAN1Q13813 2472 aaKnown RBP22.34■■□□□ 1.17
SSBP3-204ENST00000371320 IGLC3P0DOY3 106 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 RPS20P60866 119 aaKnown RBP22.34■■□□□ 1.17
SSBP3-204ENST00000371320 SSTP61278 116 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 METTL26Q96S19 204 aa22.34■■□□□ 1.17
SSBP3-204ENST00000371320 IGHV3OR16-13A0A075B7E8 117 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 IGHV3-74A0A0B4J1X5 117 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 NDUFS8O00217 210 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 MAJINQ3KP22 176 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 CLEC2AQ6UVW9 174 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 SLC50A1Q9BRV3 221 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 LINC00527Q9UJ94 153 aa22.33■■□□□ 1.17
SSBP3-204ENST00000371320 CYB5R2Q6BCY4 276 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 RNF182Q8N6D2 247 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 MEGF9Q9H1U4 602 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 ABCA2Q9BZC7 2435 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 TMEM213A2RRL7 107 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 PRAC2D3DTV9 90 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 OR5AL1P0C617 328 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 ERCC8Q13216 396 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 C19orf54Q5BKX5 351 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 SPATA12Q7Z6I5 190 aa22.32■■□□□ 1.16
SSBP3-204ENST00000371320 TRAV9-2A0A087WT02 112 aa22.31■■□□□ 1.16
SSBP3-204ENST00000371320 ZNF207O43670 478 aaKnown RBP22.31■■□□□ 1.16
SSBP3-204ENST00000371320 ATP5J2P56134 94 aa22.31■■□□□ 1.16
SSBP3-204ENST00000371320 LINC00173Q6ZV60 143 aa22.31■■□□□ 1.16
SSBP3-204ENST00000371320 IGHV3-49A0A0A0MS15 119 aa22.3■■□□□ 1.16
SSBP3-204ENST00000371320 FAM223BA6NKX1 122 aa22.3■■□□□ 1.16
SSBP3-204ENST00000371320 CRXO43186 299 aaPredicted RBP22.3■■□□□ 1.16
SSBP3-204ENST00000371320 CRIP2P52943 208 aaPredicted RBP22.3■■□□□ 1.16
SSBP3-204ENST00000371320 FAM223AQ8IWN6 122 aa22.3■■□□□ 1.16
SSBP3-204ENST00000371320 IGHV4-38-2P0DP08 117 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 FER1L6-AS1Q8NA97 138 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 MUC21A0A0G2JKD1 596 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 MUC21A0A140T8X8 626 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 RBAKDNA6NC62 111 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 SYS1-DBNDD2H3BUS1 97 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 TRGV3P03979 118 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 MUC21Q5SSG8 566 aa22.29■■□□□ 1.16
SSBP3-204ENST00000371320 FAM104BQ5XKR9 115 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms