RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CD3DP04234 171 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 TDRG1Q3Y452 100 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 Q6ZRU5 148 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
VAMP4-202ENST00000367740 OR4D10Q8NGI6 311 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
VAMP4-202ENST00000367740 LPAP08519 4548 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 PMS2P5A8MQ11 134 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 TNFAIP8O95379 198 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 ORM1P02763 201 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 SFTA3P0C7M3 94 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 CXCL2P19875 107 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 RAP2BP61225 183 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 LAGE3Q14657 143 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 ODF1Q14990 250 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 IBA57Q5T440 356 aaKnown RBP9.55□□□□□ -0.88
VAMP4-202ENST00000367740 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 TERB2Q8NHR7 220 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 RTBDNQ9BSG5 229 aaPredicted RBP9.55□□□□□ -0.88
VAMP4-202ENST00000367740 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
VAMP4-202ENST00000367740 C7orf71A4D174 169 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 SLC17A3O00476 420 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 SNRPCP09234 159 aaKnown RBP9.54□□□□□ -0.88
VAMP4-202ENST00000367740 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 TNFSF8P32971 234 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 TGFBR1P36897 503 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 CCR6P51684 374 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 SMCO1Q147U7 214 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 ACOT7LQ6ZUV0 252 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 TMEM37Q8WXS4 190 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 ZNF479Q96JC4 524 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 KRTAP4-7Q9BYR0 210 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 PRR13Q9NZ81 148 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 TP53TG3Q9ULZ0 132 aa9.54□□□□□ -0.88
VAMP4-202ENST00000367740 LOC100131303A0A0U1RQF7 123 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
VAMP4-202ENST00000367740 TIRAPP58753 221 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 RAB11AP62491 216 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 BTN1A1Q13410 526 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 ZNF846Q147U1 533 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 SCGB2B2Q4G0G5 96 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 CROCCP3Q8IVE0 287 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 NRG4Q8WWG1 115 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 CNBD2Q96M20 576 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 SLC25A31Q9H0C2 315 aa9.53□□□□□ -0.88
VAMP4-202ENST00000367740 PAIP2BQ9ULR5 123 aaKnown RBP9.53□□□□□ -0.88
VAMP4-202ENST00000367740 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 C9JCJ5 164 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 HYPMO75409 117 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 OR5G3P0C626 314 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 IAPPP10997 89 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 MUC2Q02817 5179 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 AKR1C1Q04828 323 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 CD300CQ08708 224 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
VAMP4-202ENST00000367740 C14orf166Q9Y224 244 aaKnown RBP9.52□□□□□ -0.89
VAMP4-202ENST00000367740 KLLNB2CW77 178 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 H3BTX0 84 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 LINC00869P0C866 280 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 TBPP20226 339 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 PPT1P50897 306 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 PLP1P60201 277 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 LELP1Q5T871 98 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
VAMP4-202ENST00000367740 IL5P05113 134 aa9.5□□□□□ -0.89
VAMP4-202ENST00000367740 ANXA7P20073 488 aaKnown RBP9.5□□□□□ -0.89
VAMP4-202ENST00000367740 OR10G4Q8NGN3 311 aa9.5□□□□□ -0.89
VAMP4-202ENST00000367740 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 SMIM31A0A1B0GVY4 71 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 MPDU1O75352 247 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 RPS19P39019 145 aaKnown RBP9.49□□□□□ -0.89
VAMP4-202ENST00000367740 OR10J3Q5JRS4 329 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 PATE2Q6UY27 113 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 LYZL2Q7Z4W2 148 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 PAXXQ9BUH6 204 aa9.49□□□□□ -0.89
VAMP4-202ENST00000367740 A0A0B4J2A0 478 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 APOA1P02647 267 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 AKR1C4P17516 323 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 Q6ZQT7 251 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 NHLRC2Q8NBF2 726 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 OR10P1Q8NGE3 313 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 OR52I2Q8NH67 350 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 SHPKQ9UHJ6 478 aa9.48□□□□□ -0.89
VAMP4-202ENST00000367740 RNASE4P34096 147 aaKnown RBP9.47□□□□□ -0.89
VAMP4-202ENST00000367740 ERCC8Q13216 396 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 FAAP20Q6NZ36 180 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 SAT2Q96F10 170 aaPredicted RBP9.47□□□□□ -0.89
VAMP4-202ENST00000367740 ARL6Q9H0F7 186 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms