RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 USF3Q68DE3 2245 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 IGF2RP11717 2491 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 ATP6V0E1O15342 81 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 LEPROTL1O95214 131 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 CTSGP08311 255 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 ID1P41134 155 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 C15orf32Q32M92 178 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 FER1L6-AS1Q8NA97 138 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 C10orf105Q8TEF2 133 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 HCFC1P51610 2035 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 MED14OSP0DP75 135 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 PLA2G5P39877 138 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 SLC35B1P78383 322 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 FOXE3Q13461 319 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 OR1N2Q8NGR9 330 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 GTSF1Q8WW33 167 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 PRR25Q96S07 402 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 BPESC1Q9GZL8 116 aa2.91□□□□□ -1.94
RNF38-203ENST00000353739 GSX1Q9H4S2 264 aaPredicted RBP2.91□□□□□ -1.94
RNF38-203ENST00000353739 MRPS16Q9Y3D3 137 aaKnown RBP2.91□□□□□ -1.94
RNF38-203ENST00000353739 LINC01549A6NIU2 74 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 VWC2LB2RUY7 222 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 CRXO43186 299 aaPredicted RBP2.9□□□□□ -1.94
RNF38-203ENST00000353739 CA1P00915 261 aaPredicted RBP2.9□□□□□ -1.94
RNF38-203ENST00000353739 IGF1P05019 195 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 C3orf79P0CE67 100 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 EGR2P11161 476 aaPredicted RBP2.9□□□□□ -1.94
RNF38-203ENST00000353739 G0S2P27469 103 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 GPR183P32249 361 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 C21orf62-AS1Q17RA5 79 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 COL5A1-AS1Q5SY13 56 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 PRSS3P2Q8NHM4 247 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 LINC00477Q96M19 166 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 MAP1LC3AQ9H492 121 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 ICE1Q9Y2F5 2266 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 HRNRQ86YZ3 2850 aaPredicted RBP2.9□□□□□ -1.94
RNF38-203ENST00000353739 CHD8Q9HCK8 2581 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 PPP1R17O96001 155 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 CLEC3BP05452 202 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 KIAA1644Q3SXP7 199 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 LCN12Q6JVE5 192 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 OR10J6PQ8NGY7 276 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 AJUBAQ96IF1 538 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 ZFAND3Q9H8U3 227 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 UFC1Q9Y3C8 167 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 DSCAMO60469 2012 aa2.9□□□□□ -1.94
RNF38-203ENST00000353739 B4DSR2 109 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 IGHV4-39P01824 125 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 APOHP02749 345 aaPredicted RBP2.9□□□□□ -1.95
RNF38-203ENST00000353739 ZNF138P52744 262 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 LINC00310P59036 64 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 NUTF2P61970 127 aaKnown RBP2.9□□□□□ -1.95
RNF38-203ENST00000353739 FAM120AOSQ5T036 256 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 FAM104BQ5XKR9 115 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 CDPF1Q6NVV7 123 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 C9orf47Q6ZRZ4 202 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 PRELID3AQ96N28 172 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 NXT2Q9NPJ8 142 aaKnown RBP2.9□□□□□ -1.95
RNF38-203ENST00000353739 NCOR2Q9Y618 2525 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 F8W735 103 aaPredicted RBP2.9□□□□□ -1.95
RNF38-203ENST00000353739 K7EMI3 77 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 NUPR1O60356 82 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 TRGV3P03979 118 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 MSMBP08118 114 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 NDPQ00604 133 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 LY6DQ14210 128 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 TWIST1Q15672 202 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 C19orf54Q5BKX5 351 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 KIAA2026Q5HYC2 2103 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 CLEC19AQ6UXS0 136 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 DYNAPQ8N1N2 210 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 RCHY1Q96PM5 261 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 AP5S1Q9NUS5 200 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 U3KQE9 123 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 CACNA1AO00555 2505 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 PIEZO1Q92508 2521 aa2.9□□□□□ -1.95
RNF38-203ENST00000353739 IGHV1-24A0A0C4DH33 117 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 A6NDX4 124 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 LINC01546A6NGU7 62 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 H3BTX0 84 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 BUB3O43684 328 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 LDLRAD2Q5SZI1 272 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 GDF5OSQ5U4N7 250 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 SPATA12Q7Z6I5 190 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 LINC01356Q8N9X3 169 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 C16orf92Q96LL3 132 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 CNFNQ9BYD5 112 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 SMPXQ9UHP9 88 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 PAM16Q9Y3D7 125 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 ROS1P08922 2347 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 SYS1-DBNDD2H3BUS1 97 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 IGHG2P01859 326 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 COX6B1P14854 86 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 LEPP41159 167 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 ATP5J2P56134 94 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 GAGE1Q13065 139 aa2.89□□□□□ -1.95
RNF38-203ENST00000353739 ZNF124Q15973 351 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms