RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 RPH3ALQ9UNE2 315 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 PSG8Q9UQ74 426 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 TRAPPC1Q9Y5R8 145 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 A0A0G2JLM5 398 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 FAM231BA6NCW3 169 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 K7EQM0 130 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 NDUFA4O00483 81 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 CA1P00915 261 aaPredicted RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 TRBV12-3P01733 135 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 APOHP02749 345 aaPredicted RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 FRMD6-AS1P0C7T7 363 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 PSMB8P28062 276 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 ARL3P36405 182 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 CSN1S1P47710 185 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 MEOX2P50222 304 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 RPL19P84098 196 aaKnown RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 FAM209BQ5JX69 171 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 GFI1BQ5VTD9 330 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 Q71RC1 249 aaPredicted RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 PRNTQ86SH4 94 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 CIARTQ8N365 385 aaPredicted RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 METTL26Q96S19 204 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 GFRA4Q9GZZ7 299 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
TRIM55-203ENST00000350034 GNB4Q9HAV0 340 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
TRIM55-203ENST00000350034 TRAV8-2A0A0B4J237 113 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 XKRY2A2RUG3 117 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 RBAKDNA6NC62 111 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 A8MWL6 223 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 CHEK1O14757 476 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 MT-ND6P03923 174 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 PF4V1P10720 104 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 CBLN1P23435 193 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 CRIP1P50238 77 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
TRIM55-203ENST00000350034 TCL1AP56279 114 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 PRR27Q6MZM9 219 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 Q8N2B8 174 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 GBGT1Q8N5D6 347 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 WFDC11Q8NEX6 87 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 NUP35Q8NFH5 326 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 OR4X2Q8NGF9 303 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 MYOZ3Q8TDC0 251 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 MRPL53Q96EL3 112 aaKnown RBP5.3□□□□□ -1.56
TRIM55-203ENST00000350034 ZC2HC1AQ96GY0 325 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 NEU1Q99519 415 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 SLC50A1Q9BRV3 221 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 MRPL18Q9H0U6 180 aaKnown RBP5.3□□□□□ -1.56
TRIM55-203ENST00000350034 ZNF702PQ9H963 129 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 SERTAD4Q9NUC0 356 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 NAT8BQ9UHF3 227 aa5.3□□□□□ -1.56
TRIM55-203ENST00000350034 PRRC2AP48634 2157 aaKnown RBP5.3□□□□□ -1.56
TRIM55-203ENST00000350034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRIM55-203ENST00000350034 IGKV2-40A0A087WW87 121 aaPredicted RBP5.29□□□□□ -1.56
TRIM55-203ENST00000350034 SNURFLB1AK76 121 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 K7EMT4 169 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 IGKV2D-40P01614 121 aaPredicted RBP5.29□□□□□ -1.56
TRIM55-203ENST00000350034 P01737 135 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 HLA-DQA1P01909 254 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 HLA-DMBP28068 263 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 SAPCD1Q5SSQ6 148 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 GDF5OSQ5U4N7 250 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 LCN12Q6JVE5 192 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 ATP5L2Q7Z4Y8 100 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 TMEM86BQ8N661 226 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 TEX29Q8N6K0 151 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 RNF152Q8N8N0 203 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 GTSF1Q8WW33 167 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 PRR25Q96S07 402 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 FOXC2Q99958 501 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 GPR61Q9BZJ8 451 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 CLEC5AQ9NY25 188 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 CR1P17927 2039 aa5.29□□□□□ -1.56
TRIM55-203ENST00000350034 DCHS2Q6V1P9 2916 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 HIGD1CA8MV81 97 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 SOCS3O14543 225 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 SMAD7O15105 426 aaKnown RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 ZNF207O43670 478 aaKnown RBP5.28□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV3-11P01762 117 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 AMBPP02760 352 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 ELANEP08246 267 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 ESDP10768 282 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 SLC35B1P78383 322 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 Q0VG73 95 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 FOXE3Q13461 319 aa5.28□□□□□ -1.56
TRIM55-203ENST00000350034 MRPL54Q6P161 138 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms