RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 FA2HQ7L5A8 372 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 NPBQ8NG41 125 aa14.14□□□□□ -0.15
PTP4A3-202ENST00000349124 NPIPB5A8MRT5 1133 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 MFAP4P55083 255 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 LYPD1Q8N2G4 141 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 VGLL1Q99990 258 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 HSPB8Q9UJY1 196 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 LOC105371242A0A075B767 164 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 HSBP1L1C9JCN9 74 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 CCL21O00585 134 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 CT45A10P0DMU9 189 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 OR8A1Q8NGG7 326 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 SRSF8Q9BRL6 282 aaKnown RBP14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 AAMDCQ9H7C9 122 aa14.13□□□□□ -0.15
PTP4A3-202ENST00000349124 TMEM189A5PLL7 270 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 K7ENP7 123 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 C21orf62Q9NYP8 219 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 SIGLEC8Q9NYZ4 499 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 RNF24Q9Y225 148 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 SMAD5-AS1Q9Y6J3 95 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 EGR2P11161 476 aaPredicted RBP14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 LINC01545Q5VT33 79 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 ARPC1AQ92747 370 aa14.12□□□□□ -0.15
PTP4A3-202ENST00000349124 RELQ04864 619 aaPredicted RBP14.11□□□□□ -0.15
PTP4A3-202ENST00000349124 ZNF562Q6V9R5 426 aa14.11□□□□□ -0.15
PTP4A3-202ENST00000349124 VAMP3Q15836 100 aa14.11□□□□□ -0.15
PTP4A3-202ENST00000349124 ZNF575Q86XF7 245 aa14.11□□□□□ -0.15
PTP4A3-202ENST00000349124 MSRB1Q9NZV6 116 aa14.11□□□□□ -0.15
PTP4A3-202ENST00000349124 COL12A1Q99715 3063 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 CBY3A6NI87 242 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 TAX1BP3O14907 124 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 NDUFS7O75251 213 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 IGHG4P01861 327 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 CTSGP08311 255 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 WFDC3Q8IUB2 231 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 SPTAN1Q13813 2472 aaKnown RBP14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 ODF3BA8MYP8 253 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 GAS8-AS1O95177 125 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 PRTN3P24158 256 aa14.1□□□□□ -0.15
PTP4A3-202ENST00000349124 SFTPCP11686 197 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 ZFP36P26651 326 aaKnown RBP14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 PRELID3AQ96N28 172 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 IGHV3-66A0A0C4DH42 116 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 CEACAM3P40198 252 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 CSN1S1P47710 185 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 FAM104BQ5XKR9 115 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 OR10AG1Q8NH19 301 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 PRR25Q96S07 402 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 RAB1BQ9H0U4 201 aa14.09□□□□□ -0.15
PTP4A3-202ENST00000349124 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 ERCC8Q13216 396 aa14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 MRPL51Q4U2R6 128 aaKnown RBP14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 VMO1Q7Z5L0 202 aa14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 GATD1Q8NB37 220 aa14.08□□□□□ -0.15
PTP4A3-202ENST00000349124 VPS13CQ709C8 3753 aa14.08□□□□□ -0.16
PTP4A3-202ENST00000349124 MAP1AP78559 2803 aaPredicted RBP14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 TRAV30A0A087WSZ9 112 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 ANKRD39Q53RE8 183 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 ZNF493Q6ZR52 646 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 TTC9CQ8N5M4 171 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 PRAC2D3DTV9 90 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 TWIST1Q15672 202 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 TIMD4Q96H15 378 aa14.07□□□□□ -0.16
PTP4A3-202ENST00000349124 PDE6HQ13956 83 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 IGHV2-70DA0A0C4DH43 119 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 NPYP01303 97 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 RHOGP84095 191 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 ADORA2A-AS1P86434 159 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 C2orf91Q6ZV80 131 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 IGHV7-81A0A0B4J1V7 117 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 RNF182Q8N6D2 247 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 SELENOKQ9Y6D0 94 aa14.06□□□□□ -0.16
PTP4A3-202ENST00000349124 NBL1P41271 181 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 ORMDL3Q8N138 153 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 IGHV3-49A0A0A0MS15 119 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 Q6AWC8 147 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 DEFB125Q8N687 156 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 OR4C5Q8NGB2 326 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 MS4A6AQ9H2W1 248 aa14.05□□□□□ -0.16
PTP4A3-202ENST00000349124 A0A1B0GW15 77 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 A0A1W2PPR1 153 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 LINC01548A6NM66 108 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 M0R1W7 72 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 ORM1P02763 201 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 TMEM11P17152 192 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 RPL7P18124 248 aaKnown RBP14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 GPR183P32249 361 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 CACNG7P62955 275 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 AMMECR1LQ6DCA0 310 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 MSRB2Q9Y3D2 182 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 U3KQK5 164 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 COX8AP10176 69 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 CKS2P33552 79 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 PSG9Q00887 426 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 PPP1R14DQ9NXH3 145 aa14.04□□□□□ -0.16
PTP4A3-202ENST00000349124 Q8N6K4 173 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms