RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PRO0461Q9UI25 63 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 PLCE1Q9P212 2302 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 IGHV3-72A0A0B4J1Y9 119 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 ATP5LO75964 103 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 APELAP0DMC3 54 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 WFDC2Q14508 124 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF575Q86XF7 245 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF502Q8TBZ5 544 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 RNF125Q96EQ8 232 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
HOXA1-201ENST00000343060 TECTAO75443 2155 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 LINC01619G3V211 115 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 TMEM178BH3BS89 294 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 ENSAO43768 121 aaKnown RBP7.57□□□□□ -1.2
HOXA1-201ENST00000343060 DPM2O94777 84 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 RBP4P02753 201 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 FDCSPQ8NFU4 85 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 CTSZQ9UBR2 303 aa7.57□□□□□ -1.2
HOXA1-201ENST00000343060 TMSB15BA0A087X1C1 80 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 C17orf100A8MU93 164 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 C16orf97H3BN30 126 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 NDUFB3O43676 98 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 EGR2P11161 476 aaPredicted RBP7.56□□□□□ -1.2
HOXA1-201ENST00000343060 CD59P13987 128 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 CD40P25942 277 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 CCL8P80075 99 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 KLF17Q5JT82 389 aaPredicted RBP7.56□□□□□ -1.2
HOXA1-201ENST00000343060 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 SPAG8Q99932 426 aaPredicted RBP7.56□□□□□ -1.2
HOXA1-201ENST00000343060 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 NPIPB5A8MRT5 1133 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 LEPP41159 167 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 SRSF6Q13247 344 aaKnown RBP7.56□□□□□ -1.2
HOXA1-201ENST00000343060 ASCL5Q7RTU5 278 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 C1orf210Q8IVY1 113 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 PRR25Q96S07 402 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 AAMDCQ9H7C9 122 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 KAAG1Q9UBP8 84 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 SVILO95425 2214 aa7.56□□□□□ -1.2
HOXA1-201ENST00000343060 IGLV2-18A0A075B6J9 118 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 IGLV1-47P01700 117 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 TWIST1Q15672 202 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 LPAL2Q16609 132 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 LYPD2Q6UXB3 125 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 S100A7AQ86SG5 101 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 DMDP11532 3685 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 IGHV1-3A0A0C4DH29 117 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 C12orf74Q32Q52 190 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 Q6ZS92 163 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
HOXA1-201ENST00000343060 FAM215AQ9Y5M1 114 aa7.55□□□□□ -1.2
HOXA1-201ENST00000343060 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 IL4P05112 153 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 RRN3P1Q2M238 152 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 CLUHP3Q96NS8 147 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 RNF5Q99942 180 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF80P51504 273 aaPredicted RBP7.54□□□□□ -1.2
HOXA1-201ENST00000343060 Q8N8P6 123 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 PRSS33Q8NF86 280 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 FOXC2Q99958 501 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 FBXL15Q9H469 300 aa7.54□□□□□ -1.2
HOXA1-201ENST00000343060 IGKV2-40A0A087WW87 121 aaPredicted RBP7.53□□□□□ -1.2
HOXA1-201ENST00000343060 TMEM8BA6NDV4 472 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 IGKV2D-40P01614 121 aaPredicted RBP7.53□□□□□ -1.2
HOXA1-201ENST00000343060 PRSS1P07477 247 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ADIPOQQ15848 244 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ETDBQ3ZM63 59 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 TMEM158Q8WZ71 300 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ICE1Q9Y2F5 2266 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 H3BMG7 143 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
HOXA1-201ENST00000343060 GAGE13Q4V321 117 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 TTC9CQ8N5M4 171 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 MAPKAPK5-AS1Q8N8E1 139 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 ABCA1O95477 2261 aa7.53□□□□□ -1.2
HOXA1-201ENST00000343060 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
HOXA1-201ENST00000343060 DSPP15924 2871 aaKnown RBP7.52□□□□□ -1.21
HOXA1-201ENST00000343060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.52□□□□□ -1.21
HOXA1-201ENST00000343060 BUB1B-PAK6H3BSN5 160 aa7.52□□□□□ -1.21
HOXA1-201ENST00000343060 PRRG2O14669 202 aa7.52□□□□□ -1.21
HOXA1-201ENST00000343060 RAB9AP51151 201 aa7.52□□□□□ -1.21
HOXA1-201ENST00000343060 LCNL1Q6ZST4 164 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms